RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 CREG2Q8IUH2 290 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 PAPD5Q8NDF8 572 aaKnown RBP10.28□□□□□ -0.76
LSM6-204ENST00000504181 ADPRHL1Q8NDY3 354 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 OR4A15Q8NGL6 344 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 OR5R1Q8NH85 324 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 SLC38A4Q969I6 547 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 TMEM54Q969K7 222 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 RCC1LQ96I51 464 aaKnown RBP10.28□□□□□ -0.76
LSM6-204ENST00000504181 ASCL2Q99929 193 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 GLTPQ9NZD2 209 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 CAB39Q9Y376 341 aaPredicted RBP10.28□□□□□ -0.76
LSM6-204ENST00000504181 LOC100509620A0A075B734 347 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 A0A087WUJ7 227 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 SURF4O15260 269 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 C1QCP02747 245 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 LIPFP07098 398 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 MMP7P09237 267 aaPredicted RBP10.27□□□□□ -0.77
LSM6-204ENST00000504181 ANXA11P50995 505 aaKnown RBP10.27□□□□□ -0.77
LSM6-204ENST00000504181 LY6EQ16553 131 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 ZFAND6Q6FIF0 208 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 OR4F3Q6IEY1 312 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 ZDHHC24Q6UX98 284 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 UNQ6126/PRO20091Q6UXV3 157 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 NHLRC1Q6VVB1 395 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 ADAMTSL5Q6ZMM2 481 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 ZER1Q7Z7L7 766 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 SCAIQ8N9R8 606 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 PNLDC1Q8NA58 520 aaKnown RBP10.27□□□□□ -0.77
LSM6-204ENST00000504181 POM121L2Q96KW2 1035 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 C3orf30Q96M34 536 aa10.27□□□□□ -0.77
LSM6-204ENST00000504181 TRNT1Q96Q11 434 aaKnown RBP10.27□□□□□ -0.77
LSM6-204ENST00000504181 IGHV3-64DA0A0J9YX35 117 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 A0A1W2PRD5 423 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 A0A1W2PRF3 423 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 A0A1W2PRM7 423 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 H3BSA7 217 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 H3BUX3 64 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 IFNL4K9M1U5 179 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 AZIN1O14977 448 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 PF4P02776 101 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 PF4V1P10720 104 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 PTMSP20962 102 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 AHCYP23526 432 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 CAV1Q03135 178 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 CFAP157Q5JU67 520 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 CD276Q5ZPR3 534 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 LRFN4Q6PJG9 635 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 LRRC74BQ6ZQY2 392 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 DCDC5Q6ZRR9 648 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 VMO1Q7Z5L0 202 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 SERPINA11Q86U17 422 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 RIMKLAQ8IXN7 391 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 PEX5LQ8IYB4 626 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 C19orf18Q8NEA5 215 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 Q8NFD4 153 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 MAGEB18Q96M61 343 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 MTHFD2LQ9H903 347 aaPredicted RBP10.26□□□□□ -0.77
LSM6-204ENST00000504181 NINJ2Q9NZG7 142 aa10.26□□□□□ -0.77
LSM6-204ENST00000504181 MARCOQ9UEW3 520 aaPredicted RBP10.26□□□□□ -0.77
LSM6-204ENST00000504181 TRAV36DV7A0A075B6V5 113 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 EXOC1LA0A1B0GW35 172 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 PEX11AO75192 247 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 LYPLA1O75608 230 aaPredicted RBP10.25□□□□□ -0.77
LSM6-204ENST00000504181 CPSF4O95639 269 aaKnown RBP10.25□□□□□ -0.77
LSM6-204ENST00000504181 PAHP00439 452 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 CHRM2P08172 466 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 PRPS1L1P21108 318 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 CHI3L1P36222 383 aaPredicted RBP10.25□□□□□ -0.77
LSM6-204ENST00000504181 GDI2P50395 445 aaKnown RBP10.25□□□□□ -0.77
LSM6-204ENST00000504181 HOXC5Q00444 222 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 PRB3Q04118 309 aaPredicted RBP10.25□□□□□ -0.77
LSM6-204ENST00000504181 PUDPQ08623 228 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 HABP2Q14520 560 aaPredicted RBP10.25□□□□□ -0.77
LSM6-204ENST00000504181 TAF11Q15544 211 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 LIN52Q52LA3 116 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 ANKRD46Q86W74 232 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 CLIP4Q8N3C7 705 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 OR52P1PQ8NH57 321 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 AKR7LQ8NHP1 331 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 DPF1Q92782 380 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 SLC41A3Q96GZ6 507 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 CHID1Q9BWS9 393 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 MMADHCQ9H3L0 296 aaPredicted RBP10.25□□□□□ -0.77
LSM6-204ENST00000504181 POFUT1Q9H488 388 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 RANBP3Q9H6Z4 567 aaPredicted RBP10.25□□□□□ -0.77
LSM6-204ENST00000504181 MAN2C1Q9NTJ4 1040 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 KLHL14Q9P2G3 628 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 CTSZQ9UBR2 303 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 PRDM4Q9UKN5 801 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 DNAJC15Q9Y5T4 150 aa10.25□□□□□ -0.77
LSM6-204ENST00000504181 IGKV1D-42A0A075B6H8 117 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 C11orf98E9PRG8 122 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 G3V2L1 256 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 ZFPL1O95159 310 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 DUS4LO95620 317 aaKnown RBP10.24□□□□□ -0.77
LSM6-204ENST00000504181 CHEK2O96017 543 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 SNRPAP09012 282 aaKnown RBP10.24□□□□□ -0.77
LSM6-204ENST00000504181 MYL2P10916 166 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 NPY4RP50391 375 aa10.24□□□□□ -0.77
LSM6-204ENST00000504181 MELKQ14680 651 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms