RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 ATG2BQ96BY7 2078 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 TP53BP1Q12888 1972 aaPredicted RBP13.5□□□□□ -0.25
SNF8-203ENST00000504000 LOC390937A0A1W2PQ73 354 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 A8MUA0 341 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 C17orf105B2RV13 164 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 ISG15P05161 165 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 ZNF735P0CB33 412 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 DRD1P21728 446 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 CXCR1P25024 350 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 RORAP35398 523 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 GABRA4P48169 554 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 RPL27P61353 136 aaKnown RBP13.5□□□□□ -0.25
SNF8-203ENST00000504000 DCAF7P61962 342 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 MOB3CQ70IA8 216 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 ZNF546Q86UE3 836 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 SFTPA2Q8IWL1 248 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 PXT1Q8NFP0 134 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 OR5M8Q8NGP6 311 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 PTPMT1Q8WUK0 201 aaPredicted RBP13.5□□□□□ -0.25
SNF8-203ENST00000504000 METTL21AQ8WXB1 218 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 ST8SIA2Q92186 375 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 LMF1Q96S06 567 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 MMACHCQ9Y4U1 282 aa13.5□□□□□ -0.25
SNF8-203ENST00000504000 IGLV1-36A0A0B4J1U3 117 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 FITM1A5D6W6 292 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 TSPAN9O75954 239 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 RAB6AP20340 208 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 CCR5P51681 352 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 RIDAP52758 137 aaKnown RBP13.49□□□□□ -0.25
SNF8-203ENST00000504000 MEF2DQ14814 521 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 C1orf100Q5SVJ3 147 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 PHF19Q5T6S3 580 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 ADGRE4PQ86SQ3 457 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 DUSP19Q8WTR2 217 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 DMRTA2Q96SC8 542 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 NXF5Q9H1B4 397 aaKnown RBP13.49□□□□□ -0.25
SNF8-203ENST00000504000 TXNIPQ9H3M7 391 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 UCK1Q9HA47 277 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 ZC4H2Q9NQZ6 224 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 PLCL2Q9UPR0 1127 aa13.49□□□□□ -0.25
SNF8-203ENST00000504000 OR5H14A6NHG9 310 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 NPIPB7O75200 414 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 DXOO77932 396 aaKnown RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 SEMA4FO95754 770 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 CYB5AP00167 134 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 PNPP00491 289 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 RLN2P04090 185 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 IGKV3-11P04433 115 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 PROS1P07225 676 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 RPS27P42677 84 aaKnown RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 BLKP51451 505 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 UBE2MP61081 183 aaKnown RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 ZNF117Q03924 483 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 RAB12Q6IQ22 244 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 LIN54Q6MZP7 749 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 LRRC69Q6ZNQ3 347 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 ZNF761Q86XN6 746 aaPredicted RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 BEST3Q8N1M1 668 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 OR52H1Q8NGJ2 320 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 ZNF524Q96C55 264 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 FOXRED1Q96CU9 486 aaPredicted RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 MRPS24Q96EL2 167 aaKnown RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 MMABQ96EY8 250 aaPredicted RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 MRPL22Q9NWU5 206 aaKnown RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 GPR160Q9UJ42 338 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 TNFSF18Q9UNG2 199 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 MPDZO75970 2070 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 POM121CA8CG34 1229 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 ZNF736B4DX44 427 aaPredicted RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 SRSF10O75494 262 aaKnown RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 CELA2BP08218 269 aaPredicted RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 CTSEP14091 401 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 IL32P24001 234 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 ACKR1Q16570 336 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 VWA2Q5GFL6 755 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 ATPAF1Q5TC12 328 aaPredicted RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 FAHD2BQ6P2I3 314 aaPredicted RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 FBXO46Q6PJ61 603 aaPredicted RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 C5orf46Q6UWT4 87 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 NDUFAF7Q7L592 441 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 LYPD6Q86Y78 171 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 IQCF2Q8IXL9 164 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 FRMD1Q8N878 549 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 NKAIN3Q8N8D7 197 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 STEAP2Q8NFT2 490 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 OR8S1Q8NH09 359 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 DVL3Q92997 716 aaPredicted RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 ADIPOR1Q96A54 375 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 FAHD2AQ96GK7 314 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 PTDSS2Q9BVG9 487 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 BARX1Q9HBU1 254 aaPredicted RBP13.48□□□□□ -0.25
SNF8-203ENST00000504000 WBP1LQ9NX94 342 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 SLC22A13Q9Y226 551 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 C5orf42Q9H799 3197 aa13.48□□□□□ -0.25
SNF8-203ENST00000504000 TMEM131Q92545 1883 aa13.47□□□□□ -0.25
SNF8-203ENST00000504000 MPTX1A8MV57 137 aa13.47□□□□□ -0.25
SNF8-203ENST00000504000 ALG1L2C9J202 215 aa13.47□□□□□ -0.25
SNF8-203ENST00000504000 TO15178 435 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms