RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 SPI1P17947 270 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 TCN2P20062 427 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 ANXA7P20073 488 aaKnown RBP14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 CD22P20273 847 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 TLE4Q04727 773 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 DMWDQ09019 674 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 IKZF1Q13422 519 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 STK11Q15831 433 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 AADACL3Q5VUY0 350 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 CALHM3Q86XJ0 350 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 ANGPTL5Q86XS5 388 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 SPNS2Q8IVW8 549 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 SLC25A43Q8WUT9 341 aaPredicted RBP14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 TSSK2Q96PF2 358 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 DCLRE1CQ96SD1 692 aaKnown RBP14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 NKX3-1Q99801 234 aaPredicted RBP14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 COA3Q9Y2R0 106 aaPredicted RBP14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 XIRP1Q702N8 1843 aaKnown RBP14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 RAB19A4D1S5 217 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 SIX6O95475 246 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 ZNF133P52736 654 aaPredicted RBP14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 FABP5Q01469 135 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 TCEAL2Q9H3H9 227 aaPredicted RBP14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 POFUT1Q9H488 388 aa14.78□□□□□ -0.04
HMGXB3-202ENST00000503427 CCDC163A0A0D9SF12 145 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 FGF17O60258 216 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 FCMRO60667 390 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 POU2F2P09086 479 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 P2RX1P51575 399 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 USP51Q70EK9 711 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 PRSS35Q8N3Z0 413 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 PLPP5Q8NEB5 264 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 GJC3Q8NFK1 279 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 HSD17B8Q92506 261 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 MARC2Q969Z3 335 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 MSI2Q96DH6 328 aaKnown RBP14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 ALG14Q96F25 216 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 COL11A2P13942 1736 aaPredicted RBP14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 ANKRD34BA5PLL1 514 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 METTL12A8MUP2 240 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 TXNL1O43396 289 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 ICMTO60725 284 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 M6PRP20645 277 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 DGCR2P98153 550 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 FAM213BQ8TBF2 198 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 PRMT8Q9NR22 394 aaPredicted RBP14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 NTNG1Q9Y2I2 539 aa14.77□□□□□ -0.04
HMGXB3-202ENST00000503427 A0A087WV62 115 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 SPTY2D1-AS1A0A0U1RR47 76 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 OR6C65A6NJZ3 312 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 CBX7O95931 251 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 CISD3P0C7P0 127 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 GLB1P16278 677 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 SDHAP31040 664 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 LANCL3Q6ZV70 420 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 GRAMD2AQ8IUY3 354 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 SECTM1Q8WVN6 248 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 BORCS7Q96B45 105 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 ZNF775Q96BV0 537 aaPredicted RBP14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 AIPO00170 330 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 SHOXO15266 292 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 TGM4P49221 684 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 FAM53BQ14153 422 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 ZNF266Q14584 549 aa14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 ZNF845Q96IR2 970 aaPredicted RBP14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 CGGBP1Q9UFW8 167 aaPredicted RBP14.77□□□□□ -0.05
HMGXB3-202ENST00000503427 CSF3P09919 207 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 GABRG2P18507 467 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 EPHA2P29317 976 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 HBG1P69891 147 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 HBG2P69892 147 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 RBPJQ06330 500 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 ZNF74Q16587 644 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 FAM122BQ7Z309 247 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 TMEM178AQ8NBL3 297 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 IFI44Q8TCB0 444 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 MYOTQ9UBF9 498 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 TRAPPC2LQ9UL33 140 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 PUS1Q9Y606 427 aaKnown RBP eCLIP14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 CNTRLQ7Z7A1 2325 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 OR6C76A6NM76 312 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 APOBEC1P41238 236 aaKnown RBP14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 SFRP5Q5T4F7 317 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 KCNIP4Q6PIL6 250 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 RPS19BP1Q86WX3 136 aaKnown RBP14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 CNEP1R1Q8N9A8 125 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 ANKRD9Q96BM1 317 aaPredicted RBP14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 CSF3RQ99062 836 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 SCN1AP35498 2009 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 GPR171O14626 319 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 ENPP1P22413 925 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 OMGP23515 440 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 PDLIM3Q53GG5 364 aaPredicted RBP14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 C9orf135Q5VTT2 229 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 ZNF707Q96C28 371 aaPredicted RBP14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 ABHD6Q9BV23 337 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 ZNF416Q9BWM5 594 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 NOSIPQ9Y314 301 aaKnown RBP14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 MCM3APO60318 1980 aa14.76□□□□□ -0.05
HMGXB3-202ENST00000503427 LILRA5A6NI73 299 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms