RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 POU1F1P28069 291 aa21.81■■□□□ 1.08
LSM6-202ENST00000502781 GUCA1AP43080 201 aaPredicted RBP21.81■■□□□ 1.08
LSM6-202ENST00000502781 PTDSS1P48651 473 aaKnown RBP21.81■■□□□ 1.08
LSM6-202ENST00000502781 NPRL3Q12980 569 aa21.81■■□□□ 1.08
LSM6-202ENST00000502781 ENDOGQ14249 297 aaKnown RBP21.81■■□□□ 1.08
LSM6-202ENST00000502781 KCNMB1Q16558 191 aa21.81■■□□□ 1.08
LSM6-202ENST00000502781 CYB561A3Q8NBI2 242 aa21.81■■□□□ 1.08
LSM6-202ENST00000502781 ICA1LQ8NDH6 482 aa21.81■■□□□ 1.08
LSM6-202ENST00000502781 AKAP1Q92667 903 aaKnown RBP eCLIP21.81■■□□□ 1.08
LSM6-202ENST00000502781 FBXO17Q96EF6 278 aa21.81■■□□□ 1.08
LSM6-202ENST00000502781 SRA1Q9HD15 236 aaKnown RBP21.81■■□□□ 1.08
LSM6-202ENST00000502781 RAI1Q7Z5J4 1906 aaPredicted RBP21.8■■□□□ 1.08
LSM6-202ENST00000502781 SAC3D1A6NKF1 404 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 HS3ST1O14792 307 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 MITFO75030 526 aaPredicted RBP21.8■■□□□ 1.08
LSM6-202ENST00000502781 RAB36O95755 333 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 GAAP10253 952 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 CRISP1P54107 249 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 ESRRGP62508 458 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 DBPQ10586 325 aaPredicted RBP21.8■■□□□ 1.08
LSM6-202ENST00000502781 CRMP1Q14194 572 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 PAMR1Q6UXH9 720 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 ZNF584Q8IVC4 421 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 PQLC1Q8N2U9 271 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 IL17RDQ8NFM7 739 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 NEUROG1Q92886 237 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 MS4A3Q96HJ5 214 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 WACQ9BTA9 647 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 ZNF416Q9BWM5 594 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 FN3KQ9H479 309 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 RERGLQ9H628 205 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 KRT84Q9NSB2 600 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 PDZD2O15018 2839 aa21.8■■□□□ 1.08
LSM6-202ENST00000502781 CRYAAP02489 173 aa21.79■■□□□ 1.08
LSM6-202ENST00000502781 SERPINA5P05154 406 aa21.79■■□□□ 1.08
LSM6-202ENST00000502781 CALCRP30988 508 aa21.79■■□□□ 1.08
LSM6-202ENST00000502781 RAB39AQ14964 217 aa21.79■■□□□ 1.08
LSM6-202ENST00000502781 TMEM53Q6P2H8 277 aa21.79■■□□□ 1.08
LSM6-202ENST00000502781 SLC22A25Q6T423 547 aa21.79■■□□□ 1.08
LSM6-202ENST00000502781 UGT2A3Q6UWM9 527 aa21.79■■□□□ 1.08
LSM6-202ENST00000502781 SYT9Q86SS6 491 aa21.79■■□□□ 1.08
LSM6-202ENST00000502781 ZNF611Q8N823 705 aa21.79■■□□□ 1.08
LSM6-202ENST00000502781 FOXN4Q96NZ1 517 aa21.79■■□□□ 1.08
LSM6-202ENST00000502781 KCNN2Q9H2S1 579 aa21.79■■□□□ 1.08
LSM6-202ENST00000502781 MOKQ9UQ07 419 aa21.79■■□□□ 1.08
LSM6-202ENST00000502781 IGHV2OR16-5A0A0B4J2B6 119 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 ATP6V1G2-DDX39BF2Z307 99 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 IFNGP01579 166 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 ZNF32P17041 273 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 LSM6P62312 80 aaKnown RBP21.78■■□□□ 1.08
LSM6-202ENST00000502781 GLO1Q04760 184 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 C20orf204Q6ZNR8 217 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 SLC26A10Q8NG04 563 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 CIB1Q99828 191 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 RBM4BQ9BQ04 359 aaKnown RBP21.78■■□□□ 1.08
LSM6-202ENST00000502781 HEATR1Q9H583 2144 aaKnown RBP21.78■■□□□ 1.08
LSM6-202ENST00000502781 RNF121Q9H920 327 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 UBTD1Q9HAC8 227 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 EMC7Q9NPA0 242 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 ST6GALNAC2Q9UJ37 374 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 MAST4O15021 2626 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 CSMD2Q7Z408 3487 aa21.78■■□□□ 1.08
LSM6-202ENST00000502781 CSMD1Q96PZ7 3565 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 RIIAD1A6NNX1 92 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 MPZL1O95297 269 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 HMGN1P05114 100 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 SLC25A1P53007 311 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 CDH11P55287 796 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 PCBD1P61457 104 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 HSF2Q03933 536 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 PTGES3Q15185 160 aaKnown RBP21.77■■□□□ 1.08
LSM6-202ENST00000502781 B3GLCTQ6Y288 498 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 CDH24Q86UP0 819 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 DEPDC4Q8N2C3 294 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 OR2T4Q8NH00 348 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 IGFBPL1Q8WX77 278 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 C11orf40Q8WZ69 217 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 STMN2Q93045 179 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 FBXW5Q969U6 566 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 CCNB1IP1Q9NPC3 277 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 USE1Q9NZ43 259 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 CISD1Q9NZ45 108 aaKnown RBP21.77■■□□□ 1.08
LSM6-202ENST00000502781 TIMM10BQ9Y5J6 103 aa21.77■■□□□ 1.08
LSM6-202ENST00000502781 CCDC168Q8NDH2 2452 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 C12orf71A8MTZ7 269 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 E7EQL1 145 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 SURF4O15260 269 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 GPANK1O95872 356 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 TFP02787 698 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 ALPLP05186 524 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 ZNF35P13682 527 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 ZNF3P17036 446 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 IGFBP5P24593 272 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 EPHA2P29317 976 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 PSG4Q00888 419 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 PABPC1L2AQ5JQF8 200 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 TMEM236Q5W0B7 351 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 ZNRF4Q8WWF5 429 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 NINJ1Q92982 152 aa21.76■■□□□ 1.07
LSM6-202ENST00000502781 OR2H1Q9GZK4 316 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms