RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 LAIR1Q6GTX8 287 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 RSPO2Q6UXX9 243 aaPredicted RBP15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 OR2W3Q7Z3T1 314 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 PCDHB10Q9UN67 800 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 MRPS28Q9Y2Q9 187 aaKnown RBP15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 EMC9Q9Y3B6 208 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 ANKRD31Q8N7Z5 1873 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 H0YGG7 62 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 CLUP10909 449 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 RPS2P15880 293 aaKnown RBP15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 DND1Q8IYX4 353 aaKnown RBP15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 SENP5Q96HI0 755 aaPredicted RBP15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 HHIPQ96QV1 700 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 ADOQ96SZ5 270 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 GPATCH2Q9NW75 528 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 CGGBP1Q9UFW8 167 aaPredicted RBP15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 PRAMEF26H0Y7S4 382 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 CDK2AP1O14519 115 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 NPY4RP50391 375 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 TEX19Q8NA77 164 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 HGDQ93099 445 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 ZNF160Q9HCG1 818 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 FOXJ3Q9UPW0 622 aa15.75■□□□□ 0.11
HMGXB3-201ENST00000502717 GLSO94925 669 aaPredicted RBP15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 F2RL1P55085 397 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 OR9K2Q8NGE7 335 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 MAFAQ8NHW3 353 aaPredicted RBP15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 DIO2Q92813 273 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 SPACA1Q9HBV2 294 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 LSM2Q9Y333 95 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 COL11A2P13942 1736 aaPredicted RBP15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 ANKRD61A6NGH8 418 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 OR2C1O95371 312 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 RPA2P15927 270 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 RPL23AP62750 156 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 TLE4Q04727 773 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 SFRP5Q5T4F7 317 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 TRILQ7L0X0 811 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 PLPP5Q8NEB5 264 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 RAB39BQ96DA2 213 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 CCNL2Q96S94 520 aaPredicted RBP15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 C20orf24Q9BUV8 137 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 A0A087WZY1 265 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 FFAR1O14842 300 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 CD63P08962 238 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 SLC35E2P0CK97 266 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 ZNF43P17038 809 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 AGERQ15109 404 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 TMEM65Q6PI78 240 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 FJX1Q86VR8 437 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 TGIF2Q9GZN2 237 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 WASF3Q9UPY6 502 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 PAPPA2Q9BXP8 1791 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 SYNGR4O95473 234 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 CSF2RBP32927 897 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 SNRPNP63162 240 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 ZNF266Q14584 549 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 SHHQ15465 462 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 TRMT12Q53H54 448 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 TTLL10Q6ZVT0 673 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 TMEM229BQ8NBD8 167 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 OR1S1Q8NH92 325 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 RNF170Q96K19 258 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 MTFP1Q9UDX5 166 aa15.74■□□□□ 0.11
HMGXB3-201ENST00000502717 TBPP20226 339 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 FBLP22087 321 aaKnown RBP15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 GABRR1P24046 479 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 FN3KRPQ9HA64 309 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 RHOFQ9HBH0 211 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 NSA2O95478 260 aaKnown RBP15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 CD300LGQ6UXG3 332 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 Q6ZRG5 221 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 MRPL41Q8IXM3 137 aaKnown RBP15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 MUC20Q8N307 709 aaPredicted RBP15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 VN1R2Q8NFZ6 395 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 EID2BQ96D98 161 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 ZBP1Q9H171 429 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 UMAD1C9J7I0 102 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 YY2O15391 372 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 ZNF93P35789 620 aaPredicted RBP15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 HHEXQ03014 270 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 EGR3Q06889 387 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 NSDHLQ15738 373 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 TANGO2Q6ICL3 276 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 PRR22Q8IZ63 422 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 ZNF687Q8N1G0 1237 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 HSD17B11Q8NBQ5 300 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 ORAI1Q96D31 301 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 UBE2ZQ9H832 354 aaPredicted RBP15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 OR52A1Q9UKL2 312 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 TMEM235A6NFC5 223 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 GPR137BO60478 399 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 TRHRP34981 398 aaPredicted RBP15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 HOXA1P49639 335 aaPredicted RBP15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 OR2B8PP59922 312 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 TUSC1Q2TAM9 212 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 TMEM52BQ4KMG9 183 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 OR5T1Q8NG75 326 aa15.73■□□□□ 0.11
HMGXB3-201ENST00000502717 OR6K3Q8NGY3 331 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms