RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 SLC22A11Q9NSA0 550 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 UBQLN2Q9UHD9 624 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 ZNF346Q9UL40 294 aaKnown RBP11.2□□□□□ -0.62
AFF3-215ENST00000498090 SRPK3Q9UPE1 567 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 CACNA1AO00555 2505 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 A0A1W2PQ72 361 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 FAM171A2A8MVW0 826 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 IDSB3KWA1 339 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 H7C417 338 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 GMDSO60547 372 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 ICMTO60725 284 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 IGHMP01871 453 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 F13BP05160 661 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 M6PRP20645 277 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 MST1P26927 711 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 GRPRP30550 384 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 CAPZA1P52907 286 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 RAB14P61106 215 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 ROM1Q03395 351 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 CBFBQ13951 182 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 IL11RAQ14626 422 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 LGALSLQ3ZCW2 172 aaPredicted RBP11.2□□□□□ -0.62
AFF3-215ENST00000498090 ZNF385CQ66K41 422 aaPredicted RBP11.2□□□□□ -0.62
AFF3-215ENST00000498090 ZNF626Q68DY1 528 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 SLC18B1Q6NT16 456 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 KCTD18Q6PI47 426 aaPredicted RBP11.2□□□□□ -0.62
AFF3-215ENST00000498090 NLRC3Q7RTR2 1065 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 TMPRSS12Q86WS5 348 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 MEIOBQ8N635 442 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 ZNF454Q8N9F8 522 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 ZNF721Q8TF20 911 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 TAAR8Q969N4 342 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 C4orf45Q96LM5 186 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 OR8B4Q96RC9 309 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 CMKLR1Q99788 373 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 STRADBQ9C0K7 418 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 CCDC86Q9H6F5 360 aaKnown RBP11.2□□□□□ -0.62
AFF3-215ENST00000498090 EIF3KQ9UBQ5 218 aaKnown RBP11.2□□□□□ -0.62
AFF3-215ENST00000498090 MTFP1Q9UDX5 166 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 KLHDC2Q9Y2U9 406 aa11.2□□□□□ -0.62
AFF3-215ENST00000498090 TEX51A0A1B0GUA7 166 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 UBE2QL1A1L167 161 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 LEUTXA8MZ59 168 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 ARPC1BO15143 372 aaKnown RBP11.19□□□□□ -0.62
AFF3-215ENST00000498090 SHOXO15266 292 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 OIP5O43482 229 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 HCRTR2O43614 444 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 NDUFB5O43674 189 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 AKR7A3O95154 331 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 DDAH2O95865 285 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 HPXP02790 462 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 GP1BBP13224 206 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 ADRA2CP18825 462 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 VEGFCP49767 419 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 ZNF81P51508 661 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 POLR2HP52434 150 aaKnown RBP11.19□□□□□ -0.62
AFF3-215ENST00000498090 PNLIPRP2P54317 469 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 ZP1P60852 638 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 RPL27P61353 136 aaKnown RBP11.19□□□□□ -0.62
AFF3-215ENST00000498090 ZNF117Q03924 483 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 RBMS2Q15434 407 aaKnown RBP11.19□□□□□ -0.62
AFF3-215ENST00000498090 RAB11FIP2Q7L804 512 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 MISPQ8IVT2 679 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 ZNF679Q8IYX0 411 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 DNAAF1Q8NEP3 725 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 THEM6Q8WUY1 208 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 METTL21AQ8WXB1 218 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 TMEM106AQ96A25 262 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 TSSK2Q96PF2 358 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 ADOQ96SZ5 270 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 SMAD5Q99717 465 aaKnown RBP11.19□□□□□ -0.62
AFF3-215ENST00000498090 OR8D2Q9GZM6 311 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 OR10A4Q9H209 315 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 METTL17Q9H7H0 456 aaPredicted RBP11.19□□□□□ -0.62
AFF3-215ENST00000498090 SLC39A1Q9NY26 324 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 NKIRAS2Q9NYR9 191 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 VSX1Q9NZR4 365 aaPredicted RBP11.19□□□□□ -0.62
AFF3-215ENST00000498090 COPS7AQ9UBW8 275 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 KLK11Q9UBX7 282 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 MAB21L2Q9Y586 359 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 SPTBP11277 2137 aa11.19□□□□□ -0.62
AFF3-215ENST00000498090 TCRBV16S1A1N1A0A5B0 115 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 PRSS37A4D1T9 235 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 PSMD9O00233 223 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 SULT1C2O00338 296 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 OR2T1O43869 369 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 TSPAN2O60636 221 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 RGS11O94810 467 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 OR2A4O95047 310 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 FBLP22087 321 aaKnown RBP11.18□□□□□ -0.62
AFF3-215ENST00000498090 SOX2P48431 317 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 NOVA1P51513 510 aaKnown RBP11.18□□□□□ -0.62
AFF3-215ENST00000498090 EFNA3P52797 238 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 SLC17A1Q14916 467 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 EBPQ15125 230 aaKnown RBP11.18□□□□□ -0.62
AFF3-215ENST00000498090 GRK1Q15835 563 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 TEX30Q5JUR7 227 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 ARHGAP40Q5TG30 622 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 FAM198BQ6UWH4 519 aa11.18□□□□□ -0.62
AFF3-215ENST00000498090 LYPD8Q6UX82 237 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms