RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 THBS4P35443 961 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 CTXN1P60606 82 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 RUNX1T1Q06455 604 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 SNTB2Q13425 540 aaKnown RBP13.27□□□□□ -0.29
NUP50-219ENST00000497960 DAG1Q14118 895 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 DPPA2Q7Z7J5 298 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 SKA3Q8IX90 412 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 SYT14Q8NB59 555 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 MAPK1IP1LQ8NDC0 245 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 MCHR2Q969V1 340 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 NRBF2Q96F24 287 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 FEVQ99581 238 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 NIPSNAP1Q9BPW8 284 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 MRPL13Q9BYD1 178 aaKnown RBP13.27□□□□□ -0.29
NUP50-219ENST00000497960 PLK3Q9H4B4 646 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 NOX3Q9HBY0 568 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 TBC1D23Q9NUY8 699 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 CDH10Q9Y6N8 788 aa13.27□□□□□ -0.29
NUP50-219ENST00000497960 NPIPB13A6NJU9 1138 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 NPIPB4C9JG80 1138 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 TRMUO75648 421 aaKnown RBP13.26□□□□□ -0.29
NUP50-219ENST00000497960 BAG2O95816 211 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 F12P00748 615 aaPredicted RBP13.26□□□□□ -0.29
NUP50-219ENST00000497960 TP53P04637 393 aaPredicted RBP13.26□□□□□ -0.29
NUP50-219ENST00000497960 ANXA8P13928 327 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 ZNF14P17017 642 aaPredicted RBP13.26□□□□□ -0.29
NUP50-219ENST00000497960 PRKACGP22612 351 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 NR4A1P22736 598 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 SLC6A6P31641 620 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 PPP2R2BQ00005 443 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 MYBPC1Q00872 1141 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 GALK2Q01415 458 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 FHL1Q13642 323 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 RCN1Q15293 331 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 HIST3H3Q16695 136 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 NRN1LQ496H8 165 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 ARMC4Q5T2S8 1044 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 KRT80Q6KB66 452 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 NIPBLQ6KC79 2804 aaeCLIP13.26□□□□□ -0.29
NUP50-219ENST00000497960 RPL13AP3Q6NVV1 102 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 TMEM53Q6P2H8 277 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 RASSF6Q6ZTQ3 369 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 PQLC1Q8N2U9 271 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 ZNF525Q8N782 197 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 LRRC75AQ8NAA5 344 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 OR10H5Q8NGA6 315 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 FAM168AQ92567 244 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 ZNF570Q96NI8 536 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 VRK1Q99986 396 aaPredicted RBP13.26□□□□□ -0.29
NUP50-219ENST00000497960 GABARAPL1Q9H0R8 117 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 TXNIPQ9H3M7 391 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 EGLN3Q9H6Z9 239 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 RNF121Q9H920 327 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 ZNF224Q9NZL3 707 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 IL20RAQ9UHF4 553 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 OAZ3Q9UMX2 235 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 VPS13CQ709C8 3753 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 NF1P21359 2839 aa13.26□□□□□ -0.29
NUP50-219ENST00000497960 NSD1Q96L73 2696 aaPredicted RBP13.26□□□□□ -0.29
NUP50-219ENST00000497960 IGHV4-30-2A0A087WSY4 118 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 MGRN1O60291 552 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 PPP1R3DO95685 299 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 IGHMP01871 453 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 SERPINA5P05154 406 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 ERCC1P07992 297 aaPredicted RBP13.25□□□□□ -0.29
NUP50-219ENST00000497960 PATE4P0C8F1 98 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 SLC25A16P16260 332 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 PCSK6P29122 969 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 FXYD6P3P58550 94 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 RPL27P61353 136 aaKnown RBP13.25□□□□□ -0.29
NUP50-219ENST00000497960 ERVK-25P63136 954 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 ELF3P78545 371 aaPredicted RBP13.25□□□□□ -0.29
NUP50-219ENST00000497960 CD47Q08722 323 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 RAB39AQ14964 217 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 KRTAP21-3Q3LHN1 58 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 SLC36A2Q495M3 483 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 FAM205BPQ63HN1 556 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 THSD4Q6ZMP0 1018 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 SLC16A14Q7RTX9 510 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 TEX47Q8TBZ9 253 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 DNAJC9Q8WXX5 260 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 SAMD8Q96LT4 415 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 ZNF75AQ96N20 296 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 TSPAN32Q96QS1 320 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 GPX7Q96SL4 187 aaPredicted RBP13.25□□□□□ -0.29
NUP50-219ENST00000497960 SH3GL3Q99963 347 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 RAB1BQ9H0U4 201 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 KCNN2Q9H2S1 579 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 GRHPRQ9UBQ7 328 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 ADAM18Q9Y3Q7 739 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 CMAHPQ9Y471 501 aa13.25□□□□□ -0.29
NUP50-219ENST00000497960 SONP18583 2426 aaKnown RBP13.25□□□□□ -0.29
NUP50-219ENST00000497960 JMJD1CQ15652 2540 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 H3BN98 237 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 PTP4A3O75365 173 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 CD14P08571 375 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 ZNF35P13682 527 aa13.24□□□□□ -0.29
NUP50-219ENST00000497960 ZNF26P17031 533 aaPredicted RBP13.24□□□□□ -0.29
NUP50-219ENST00000497960 PPOXP50336 477 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms