RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 SPARCP09486 303 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 ELNP15502 786 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 CD53P19397 219 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 RAB5CP51148 216 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 SSTP61278 116 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 ECH1Q13011 328 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 IL10RAQ13651 578 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 LY6G5CQ5SRR4 150 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 NKAIN2Q5VXU1 208 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 DHRS11Q6UWP2 260 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 SKA3Q8IX90 412 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 KDM8Q8N371 416 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZNF461Q8TAF7 563 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 MARCH1Q8TCQ1 289 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 GPR148Q8TDV2 347 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 VOPP1Q96AW1 172 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 TMPRSS5Q9H3S3 457 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 MMP26Q9NRE1 261 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 CKLFQ9UBR5 152 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 PCYT1BQ9Y5K3 369 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 C5orf52A6NGY3 159 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZNF354AO60765 605 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 IGHV2-70P01814 119 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 LRG1P02750 347 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 RAB5AP20339 215 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 BCL6P41182 706 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 CSNK1G2P78368 415 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 CHAF1BQ13112 559 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 MICBQ29980 383 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 MFSD12Q6NUT3 480 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 PARS2Q7L3T8 475 aaKnown RBP9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZNF679Q8IYX0 411 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 FIBINQ8TAL6 211 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 THOC3Q96J01 351 aaKnown RBP9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 HHIPL1Q96JK4 782 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 SDF2Q99470 211 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 FAM83CQ9BQN1 747 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZNF700Q9H0M5 742 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 KCNJ16Q9NPI9 418 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 A0A087X0M5 115 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 A0A1B0GX30 115 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 LEFTY2O00292 366 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 NUDT14O95848 222 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 WNT11O96014 354 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 CTSLP07711 333 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 OR8U9P0C7N5 309 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 THEGLP0DJG4 465 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 CALCBP10092 127 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 LPAR6P43657 344 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 CTXN1P60606 82 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 BIKQ13323 160 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 TRAPPC6BQ86SZ2 158 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 ADAD2Q8NCV1 583 aaKnown RBP9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 OR8U1Q8NH10 309 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 OR51F2Q8NH61 342 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 MITD1Q8WV92 249 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 PIK3IP1Q96FE7 263 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 SLC41A2Q96JW4 573 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 PRSS27Q9BQR3 290 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 ATG101Q9BSB4 218 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 CENPMQ9NSP4 180 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 RCC2Q9P258 522 aaKnown RBP9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 IL36AQ9UHA7 158 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 WASF3Q9UPY6 502 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 OR1A2Q9Y585 309 aa9.65□□□□□ -0.87
TRAPPC12-223ENST00000497597 UMAD1C9J7I0 102 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 J3QRE1 110 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 OR10H2O60403 315 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 MT-ND4LP03901 98 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 ITGA5P08648 1049 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 FBP1P09467 338 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 OR8U8P0C7N1 319 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 CAMLGP49069 296 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 SURF2Q15527 256 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 DCST2Q5T1A1 773 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 NRROSQ86YC3 692 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 LRRC25Q8N386 305 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 TGM7Q96PF1 710 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 SPACA5Q96QH8 159 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 TAF9BQ9HBM6 251 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 ANKRD10Q9NXR5 420 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 GAR1Q9NY12 217 aaKnown RBP9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 KLHDC2Q9Y2U9 406 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 TRPM7Q96QT4 1865 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 ZSWIM8A7E2V4 1837 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 PRR32B1ATL7 298 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 C9JQL5 133 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 EIF4E2O60573 245 aaKnown RBP9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 CYTIPO60759 359 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 OLFM2O95897 454 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 FABP4P15090 132 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 HPGDP15428 266 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 MDKP21741 143 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 ZNF84P51523 738 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 RIPPLY1Q0D2K3 151 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 P4HA3Q7Z4N8 544 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 ZAR1Q86SH2 424 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 C12orf40Q86WS4 652 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 ZNF101Q8IZC7 436 aa9.64□□□□□ -0.87
TRAPPC12-223ENST00000497597 ZNF563Q8TA94 476 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms