RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 FOXN4Q96NZ1 517 aa13.9□□□□□ -0.18
DNMT3A-215ENST00000496570 DOK1Q99704 481 aa13.9□□□□□ -0.18
DNMT3A-215ENST00000496570 CHID1Q9BWS9 393 aa13.9□□□□□ -0.18
DNMT3A-215ENST00000496570 WNT5BQ9H1J7 359 aa13.9□□□□□ -0.18
DNMT3A-215ENST00000496570 RNF121Q9H920 327 aa13.9□□□□□ -0.18
DNMT3A-215ENST00000496570 POLE4Q9NR33 117 aa13.9□□□□□ -0.18
DNMT3A-215ENST00000496570 POMPQ9Y244 141 aa13.9□□□□□ -0.18
DNMT3A-215ENST00000496570 SETD2Q9BYW2 2564 aaPredicted RBP13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 A0A1W2PPL8 197 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 TCRBV3S1A0A5B6 114 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 DCTN6O00399 190 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 XKRYO14609 159 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 ARPC3O15145 178 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 SNAP29O95721 258 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 TP53P04637 393 aaPredicted RBP13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 INHBBP09529 407 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 APEX1P27695 318 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 IFNGR2P38484 337 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 RPS6KA3P51812 740 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 TMEM179BQ7Z7N9 219 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 ADCK1Q86TW2 530 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 OR8D4Q8NGM9 314 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 AKR7LQ8NHP1 331 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 POP5Q969H6 163 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 LRGUKQ96M69 825 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 SORCS2Q96PQ0 1159 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 ZNF416Q9BWM5 594 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 MRPL37Q9BZE1 423 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 PLA2G12AQ9BZM1 189 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 OR2H1Q9GZK4 316 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 NDEL1Q9GZM8 345 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 EGLN3Q9H6Z9 239 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 EMC7Q9NPA0 242 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 SLC7A8Q9UHI5 535 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 U3KQV3 271 aa13.89□□□□□ -0.19
DNMT3A-215ENST00000496570 RTTNQ86VV8 2226 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 LOC100509620A0A075B734 347 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 SSX4O60224 188 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 LY6HO94772 140 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 CCNB2O95067 398 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 MPZL1O95297 269 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 HIST1H1CP16403 213 aaKnown RBP13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 MSR1P21757 451 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 SLC6A6P31641 620 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 GLRXP35754 106 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 MICAQ29983 383 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 OTPQ5XKR4 325 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 SVOPLQ8N434 492 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 OR10H5Q8NGA6 315 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 MRPL24Q96A35 216 aaKnown RBP13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 SLCO4A1Q96BD0 722 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 POM121L2Q96KW2 1035 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 TSSK2Q96PF2 358 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 ERMAPQ96PL5 475 aaPredicted RBP13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 BDH2Q9BUT1 245 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 NUAK2Q9H093 628 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 BARX1Q9HBU1 254 aaPredicted RBP13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 IL20Q9NYY1 176 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 COA3Q9Y2R0 106 aaPredicted RBP13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 SAMHD1Q9Y3Z3 626 aaKnown RBP13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 CDH10Q9Y6N8 788 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 PMF1-BGLAPU3KQ54 211 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 ZFHX3Q15911 3703 aa13.88□□□□□ -0.19
DNMT3A-215ENST00000496570 A0A096LNT2 108 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 IGLV1-36A0A0B4J1U3 117 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 DHRS12A0PJE2 317 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 BHLHE40O14503 412 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 SLC16A7O60669 478 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 GPANK1O95872 356 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 PPOXP50336 477 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 EFNA4P52798 201 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 ERVS71-1P61550 626 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 SNRPD2P62316 118 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 FLOT2Q14254 428 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 RAB35Q15286 201 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 ZNF362Q5T0B9 420 aaPredicted RBP13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 LRP11Q86VZ4 500 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 LINC00471Q8N535 108 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 ZNF525Q8N782 197 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 AQP11Q8NBQ7 271 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 NMNAT3Q96T66 252 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 DDOQ99489 341 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 IFT27Q9BW83 186 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 DGCR6LQ9BY27 220 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 C1orf198Q9H425 327 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 CCNB1IP1Q9NPC3 277 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 MYEF2Q9P2K5 600 aaKnown RBP13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 CMAHPQ9Y471 501 aa13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 NSD1Q96L73 2696 aaPredicted RBP13.87□□□□□ -0.19
DNMT3A-215ENST00000496570 CR1P17927 2039 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 IGHV4-30-2A0A087WSY4 118 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 SMAD7O15105 426 aaKnown RBP13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 KHDRBS3O75525 346 aaKnown RBP13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 F12P00748 615 aaPredicted RBP13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 CST1P01037 141 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 FAM157BP0CG42 384 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 GAAP10253 952 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 STOMP27105 288 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 PCSK6P29122 969 aa13.86□□□□□ -0.19
DNMT3A-215ENST00000496570 WNT5AP41221 380 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms