RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 GHRLQ9UBU3 117 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 ATPIF1Q9UII2 106 aa3.69□□□□□ -1.82
SF3B1-212ENST00000496458 FRMPD3Q5JV73 1810 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 TUBGCP6Q96RT7 1819 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 CEMIPQ8WUJ3 1361 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 A0A1B0GVG6 124 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 LRP5LA4QPB2 252 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 OR6C65A6NJZ3 312 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 GOLGA8KD6RF30 607 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 KMOO15229 486 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 PRKAB2O43741 272 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 N4BP1O75113 896 aaKnown RBP3.68□□□□□ -1.82
SF3B1-212ENST00000496458 ATP6V1G2O95670 118 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 GLAP06280 429 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 NR2C1P13056 603 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 CCNOP22674 350 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 MMP11P24347 488 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 HMGB2P26583 209 aaKnown RBP3.68□□□□□ -1.82
SF3B1-212ENST00000496458 HNRNPH3P31942 346 aaKnown RBP3.68□□□□□ -1.82
SF3B1-212ENST00000496458 CDH5P33151 784 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-212ENST00000496458 HAAOP46952 286 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 P2RY1P47900 373 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 MYL6P60660 151 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 TNNC1P63316 161 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 BCL2L1Q07817 233 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 CASP8Q14790 479 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 ATXN7L3Q14CW9 347 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-212ENST00000496458 HSDL1Q3SXM5 330 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 ZNF57Q68EA5 555 aaPredicted RBP3.68□□□□□ -1.82
SF3B1-212ENST00000496458 H3F3CQ6NXT2 135 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 C8orf74Q6P047 294 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 UQCC3Q6UW78 93 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 TMEM179BQ7Z7N9 219 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 TMEM17Q86X19 198 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 CLEC4FQ8N1N0 589 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 FAM86B1Q8N7N1 296 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 SDR9C7Q8NEX9 313 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 OR9G4Q8NGQ1 327 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 OR1L6Q8NGR2 347 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 MARC2Q969Z3 335 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 ASB9Q96DX5 294 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 C12orf42Q96LP6 360 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 IL4I1Q96RQ9 567 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 SLC29A1Q99808 456 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 DUSP16Q9BY84 665 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 ROGDIQ9GZN7 287 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 ANKRD19PQ9H560 264 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 C12orf10Q9HB07 376 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 LY9Q9HBG7 655 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 CSNK1G1Q9HCP0 422 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 NT5MQ9NPB1 228 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 MYOZ2Q9NPC6 264 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 ZNF302Q9NR11 478 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 PXMP2Q9NR77 195 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 LYARQ9NX58 379 aaKnown RBP3.68□□□□□ -1.82
SF3B1-212ENST00000496458 STARD10Q9Y365 291 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 FAM32AQ9Y421 112 aaKnown RBP3.68□□□□□ -1.82
SF3B1-212ENST00000496458 LRRC42Q9Y546 428 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 TIMM10BQ9Y5J6 103 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 C5P01031 1676 aa3.68□□□□□ -1.82
SF3B1-212ENST00000496458 UBR3Q6ZT12 1888 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 SIPA1L3O60292 1781 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 SUPT3HO75486 399 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 LCA5LO95447 670 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 IGKV3-11P04433 115 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 SERPINE2P07093 398 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 H2BFMP0C1H6 154 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 ANXA3P12429 323 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 ZNF17P17021 662 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 FUT3P21217 361 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 STOMP27105 288 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 YWHABP31946 246 aaKnown RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 HPCAL1P37235 193 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 NAA10P41227 235 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 CRATP43155 626 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 MAGEA5P43359 124 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 UQCRFS1P47985 274 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 KCNJ3P48549 501 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 DUSP3P51452 185 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 ACLYP53396 1101 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 HERPUD1Q15011 391 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 MAPRE2Q15555 327 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 VAMP3Q15836 100 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 MRPL23Q16540 153 aaKnown RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 IL17AQ16552 155 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 ZNF658BQ4V348 819 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 GPR157Q5UAW9 335 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 PTRHD1Q6GMV3 140 aaKnown RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 CCDC137Q6PK04 289 aaKnown RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 HSDL2Q6YN16 418 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 BHLHA15Q7RTS1 189 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 MOB3BQ86TA1 216 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 RBM45Q8IUH3 476 aaKnown RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 C12orf56Q8IXR9 622 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 OR10H4Q8NGA5 316 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 CCDC42Q96M95 316 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 ZNF317Q96PQ6 595 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-212ENST00000496458 P2RY13Q9BPV8 354 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 FEM1AQ9BSK4 669 aa3.67□□□□□ -1.82
SF3B1-212ENST00000496458 SPZ1Q9BXG8 430 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms