RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ICMTO60725 284 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 DCTN3O75935 186 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 CST2P09228 141 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 TACSTD2P09758 323 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 ZNF32P17041 273 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 MSR1P21757 451 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 STOMP27105 288 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 ALDH3B1P43353 468 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 CHN2P52757 468 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 RIN1Q13671 783 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 NKPD1Q17RQ9 610 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 SPATS1Q496A3 300 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 FAM166AQ6J272 317 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 PODNL1Q6PEZ8 512 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 TBPL2Q6SJ96 375 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 FAM122BQ7Z309 247 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 C1orf174Q8IYL3 243 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 FAM86B1Q8N7N1 296 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 CLDN22Q8N7P3 220 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 SNX33Q8WV41 574 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 HPS1Q92902 700 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 FAM46AQ96IP4 442 aaKnown RBP13.49□□□□□ -0.25
HDAC4-213ENST00000496347 C7orf34Q96L11 122 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 ZNF570Q96NI8 536 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 WACQ9BTA9 647 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 SLCO1C1Q9NYB5 712 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 MYEF2Q9P2K5 600 aaKnown RBP13.49□□□□□ -0.25
HDAC4-213ENST00000496347 TAGLN3Q9UI15 199 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 FZR1Q9UM11 496 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 ADAM18Q9Y3Q7 739 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 KIAA1324LA8MWY0 1029 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-213ENST00000496347 NDUFB2O95178 105 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 IFNA2P01563 188 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 SEMG1P04279 462 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 CCL2P13500 99 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 APEX1P27695 318 aaKnown RBP13.48□□□□□ -0.25
HDAC4-213ENST00000496347 UCP2P55851 309 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 ERVK-25P63136 954 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 KRT72Q14CN4 511 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 MAD2L1BPQ15013 274 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-213ENST00000496347 SGCAQ16586 387 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 PCGF3Q3KNV8 242 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 GPR139Q6DWJ6 353 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 ADCK1Q86TW2 530 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 LRP11Q86VZ4 500 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 RNF148Q8N7C7 305 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 CPEB3Q8NE35 698 aaKnown RBP13.48□□□□□ -0.25
HDAC4-213ENST00000496347 SYNPRQ8TBG9 265 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 C11orf40Q8WZ69 217 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 RSRC1Q96IZ7 334 aaKnown RBP13.48□□□□□ -0.25
HDAC4-213ENST00000496347 OR2H1Q9GZK4 316 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 CHODLQ9H9P2 273 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 DUSP13Q9UII6 198 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 KCNS2Q9ULS6 477 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 SIGLEC7Q9Y286 467 aa13.48□□□□□ -0.25
HDAC4-213ENST00000496347 TRBV4-1A0A0J9YWV2 114 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 A0A1W2PPL8 197 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 PRSS37A4D1T9 235 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 C12orf71A8MTZ7 269 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 H3BSA7 217 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 MT-ND5P03915 603 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 LCKP06239 509 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 FAM157CP0CG43 387 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 ZNF26P17031 533 aaPredicted RBP13.47□□□□□ -0.25
HDAC4-213ENST00000496347 ACHEP22303 614 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 LAP3P28838 519 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 SDHAP31040 664 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 OMPP47874 163 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 GDI2P50395 445 aaKnown RBP13.47□□□□□ -0.25
HDAC4-213ENST00000496347 SMIM11AP58511 58 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 KRR1Q13601 381 aaKnown RBP13.47□□□□□ -0.25
HDAC4-213ENST00000496347 MOGQ16653 247 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 MESTQ5EB52 335 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 C16orf89Q6UX73 402 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 SYT9Q86SS6 491 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 ALDH16A1Q8IZ83 802 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 MSI2Q96DH6 328 aaKnown RBP13.47□□□□□ -0.25
HDAC4-213ENST00000496347 POM121L2Q96KW2 1035 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 OR51B6Q9H340 312 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 POLE4Q9NR33 117 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 NDRG4Q9ULP0 352 aaKnown RBP13.47□□□□□ -0.25
HDAC4-213ENST00000496347 TIMM10BQ9Y5J6 103 aa13.47□□□□□ -0.25
HDAC4-213ENST00000496347 TEX13CA0A0J9YWL9 993 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 LOC100289279A0A1B0GTE1 492 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 C5orf49A4QMS7 147 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 H7C1C5 153 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 ARPC2O15144 300 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 LMX1BO60663 402 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 NAT2P11245 290 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 TCN1P20061 433 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-213ENST00000496347 MNAT1P51948 309 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 ERVS71-1P61550 626 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 LCN6P62502 163 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 PSG4Q00888 419 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 SCRN3Q0VDG4 424 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 ENDOGQ14249 297 aaKnown RBP13.46□□□□□ -0.25
HDAC4-213ENST00000496347 ELFN2Q5R3F8 820 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 UGT2A3Q6UWM9 527 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 PIGWQ7Z7B1 504 aa13.46□□□□□ -0.25
HDAC4-213ENST00000496347 ZNF101Q8IZC7 436 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms