RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 SYPL1Q16563 259 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 DUSP5Q16690 384 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 CYP51A1Q16850 503 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 CLEC12BQ2HXU8 276 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 GPAT3Q53EU6 434 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 BEX5Q5H9J7 111 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 RAET1LQ5VY80 246 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 MFSD12Q6NUT3 480 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 CDC73Q6P1J9 531 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 ZCCHC12Q6PEW1 402 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 KLHL24Q6TFL4 600 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 STAC2Q6ZMT1 411 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 ASRGL1Q7L266 308 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 OLIG3Q7RTU3 272 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 CLIP4Q8N3C7 705 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 ZNF611Q8N823 705 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 FADS6Q8N9I5 356 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 SCCPDHQ8NBX0 429 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 OR2M3Q8NG83 312 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 OR4K17Q8NGC6 315 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 OR8J3Q8NGG0 315 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 OR5D16Q8NGK9 328 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 PIK3R3Q92569 461 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 CDS1Q92903 461 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 MAL2Q969L2 176 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 EFHD2Q96C19 240 aaPredicted RBP5.62□□□□□ -1.51
VIM-207ENST00000495528 VSTM2LQ96N03 204 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 BTBD9Q96Q07 612 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 KCTD14Q9BQ13 255 aaPredicted RBP5.62□□□□□ -1.51
VIM-207ENST00000495528 RTN4RQ9BZR6 473 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 KAT8Q9H7Z6 458 aaKnown RBP5.62□□□□□ -1.51
VIM-207ENST00000495528 PLSCR4Q9NRQ2 329 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 AASSQ9UDR5 926 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 CD300AQ9UGN4 299 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 CLEC4AQ9UMR7 237 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 AP3M1Q9Y2T2 418 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 ZNF175Q9Y473 711 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 ZANQ9Y493 2812 aa5.62□□□□□ -1.51
VIM-207ENST00000495528 SONP18583 2426 aaKnown RBP5.62□□□□□ -1.51
VIM-207ENST00000495528 STAB1Q9NY15 2570 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 ELOVL7A1L3X0 281 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 OR2M5A3KFT3 312 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 PRORSD1PA6NEY8 169 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 C5orf58C9J3I9 102 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 HS3ST1O14792 307 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 SCO2O43819 266 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 FADS1O60427 444 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 TMCC2O75069 709 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 GMNNO75496 209 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 NKX2-2O95096 273 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 IFI6P09912 130 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 TFPTP0C1Z6 253 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 NQO1P15559 274 aaKnown RBP5.61□□□□□ -1.51
VIM-207ENST00000495528 NCK1P16333 377 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 CHATP28329 748 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 IL12BP29460 328 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 KRT20P35900 424 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 SLC6A8P48029 635 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 RFX3P48380 749 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 KHKP50053 298 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 RPS4XP62701 263 aaKnown RBP5.61□□□□□ -1.51
VIM-207ENST00000495528 MS4A2Q01362 244 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 ZNF155Q12901 538 aaPredicted RBP5.61□□□□□ -1.51
VIM-207ENST00000495528 VEZF1Q14119 521 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 ZNHIT3Q15649 155 aaPredicted RBP5.61□□□□□ -1.51
VIM-207ENST00000495528 SGCBQ16585 318 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 C2orf68Q2NKX9 166 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 CTU2Q2VPK5 515 aaKnown RBP5.61□□□□□ -1.51
VIM-207ENST00000495528 SAMD4BQ5PRF9 694 aaKnown RBP5.61□□□□□ -1.51
VIM-207ENST00000495528 GCNT6Q5T4J0 391 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 CCNJQ5T5M9 372 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 ATAD3BQ5T9A4 648 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 GLYATQ6IB77 296 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 PODNL1Q6PEZ8 512 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 C16orf62Q7Z3J2 963 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 ARPINQ7Z6K5 226 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 GALNT10Q86SR1 603 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 CALHM3Q86XJ0 350 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 PTOV1Q86YD1 416 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 HIPK1Q86Z02 1210 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 MICU2Q8IYU8 434 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 COX18Q8N8Q8 333 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 ANKFN1Q8N957 763 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 CDRT4Q8N9R6 151 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 OR2T12Q8NG77 320 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 LILRB1Q8NHL6 650 aaPredicted RBP5.61□□□□□ -1.51
VIM-207ENST00000495528 MIPOL1Q8TD10 442 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 DUSP19Q8WTR2 217 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 SLC38A5Q8WUX1 472 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 NUDCD2Q8WVJ2 157 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 DTNBP1Q96EV8 351 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 MS4A4EQ96PG1 132 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 SDF2Q99470 211 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 LMF2Q9BU23 707 aaKnown RBP5.61□□□□□ -1.51
VIM-207ENST00000495528 REG4Q9BYZ8 158 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 LRMDAQ9H2I8 198 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 PIGUQ9H490 435 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 YAE1D1Q9NRH1 226 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 EXD2Q9NVH0 621 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 GIN1Q9NXP7 522 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms