RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 ZNF32P17041 273 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 CCNOP22674 350 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 PRTN3P24158 256 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 WNT5AP41221 380 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 RBM34P42696 430 aaKnown RBP12.38□□□□□ -0.43
PCCB-219ENST00000494742 GDI2P50395 445 aaKnown RBP12.38□□□□□ -0.43
PCCB-219ENST00000494742 RPL18Q07020 188 aaKnown RBP12.38□□□□□ -0.43
PCCB-219ENST00000494742 AGKQ53H12 422 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 THEM4Q5T1C6 240 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 INTS11Q5TA45 600 aaKnown RBP12.38□□□□□ -0.43
PCCB-219ENST00000494742 FAM27BQ5VT28 67 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 ZER1Q7Z7L7 766 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 RBM45Q8IUH3 476 aaKnown RBP12.38□□□□□ -0.43
PCCB-219ENST00000494742 ALDH16A1Q8IZ83 802 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 DPP10Q8N608 796 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 SYT14Q8NB59 555 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 OR4D11Q8NGI4 311 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 VANGL1Q8TAA9 524 aaPredicted RBP12.38□□□□□ -0.43
PCCB-219ENST00000494742 SLC25A40Q8TBP6 338 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 IPCEF1Q8WWN9 437 aaPredicted RBP12.38□□□□□ -0.43
PCCB-219ENST00000494742 LIPHQ8WWY8 451 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 LRRC58Q96CX6 371 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 EBF4Q9BQW3 602 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 POLR2J2Q9GZM3 115 aaKnown RBP12.38□□□□□ -0.43
PCCB-219ENST00000494742 POLR2J3Q9H1A7 115 aaKnown RBP12.38□□□□□ -0.43
PCCB-219ENST00000494742 MEPEQ9NQ76 525 aaPredicted RBP12.38□□□□□ -0.43
PCCB-219ENST00000494742 INIPQ9NRY2 104 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 LEF1Q9UJU2 399 aaPredicted RBP12.38□□□□□ -0.43
PCCB-219ENST00000494742 NUP50Q9UKX7 468 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 UGT2A1Q9Y4X1 527 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 PPIAL4AQ9Y536 164 aa12.38□□□□□ -0.43
PCCB-219ENST00000494742 LOC100509620A0A075B734 347 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 C5orf49A4QMS7 147 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 ZSCAN5BA6NJL1 495 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 F13BP05160 661 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 FUT1P19526 365 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 TUBG1P23258 451 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 MPV17P39210 176 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 ARMCX4Q5H9R4 360 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 BEND6Q5SZJ8 279 aaPredicted RBP12.37□□□□□ -0.43
PCCB-219ENST00000494742 ARMC4Q5T2S8 1044 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 TSPYL5Q86VY4 417 aaPredicted RBP12.37□□□□□ -0.43
PCCB-219ENST00000494742 SIGLECL1Q8N7X8 197 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 DEFB108BQ8NET1 73 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 FNDC8Q8TC99 324 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 SLC26A7Q8TE54 656 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 C22orf15Q8WYQ4 148 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 NABP1Q96AH0 204 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 NMD3Q96D46 503 aaKnown RBP12.37□□□□□ -0.43
PCCB-219ENST00000494742 OR2J1Q9GZK6 312 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 ELOVL3Q9HB03 270 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 TUBG2Q9NRH3 451 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 PLEK2Q9NYT0 353 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 UBAP1Q9NZ09 502 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 PURGQ9UJV8 347 aaKnown RBP12.37□□□□□ -0.43
PCCB-219ENST00000494742 NPTNQ9Y639 398 aa12.37□□□□□ -0.43
PCCB-219ENST00000494742 POM121CA8CG34 1229 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 ATP8B1O43520 1251 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 OR7A10O76100 309 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 IGHV2-70P01814 119 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 IGHMP01871 453 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 ZFP36P26651 326 aaKnown RBP12.36□□□□□ -0.43
PCCB-219ENST00000494742 PCGF2P35227 344 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 PCBD1P61457 104 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 PPP1CBP62140 327 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 PSG4Q00888 419 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 ZNF154Q13106 437 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 TAF11Q15544 211 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 TMEM155Q4W5P6 130 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 TMEM255AQ5JRV8 349 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 SPATA46Q5T0L3 261 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 ARL9Q6T311 187 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 DHDDSQ86SQ9 333 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 KLHL36Q8N4N3 616 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 SPICQ8N5J4 248 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 TAMM41Q96BW9 452 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 CGREF1Q99674 301 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 KAT8Q9H7Z6 458 aaKnown RBP12.36□□□□□ -0.43
PCCB-219ENST00000494742 NANOGQ9H9S0 305 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 NDUFAF1Q9Y375 327 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 AUP1Q9Y679 476 aa12.36□□□□□ -0.43
PCCB-219ENST00000494742 ARHGAP32A7KAX9 2087 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 HTR3EA5X5Y0 456 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 DNAJC9-AS1A6NH13 148 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 A8MXK9 166 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 CLDN34H7C241 214 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 SLC2A10O95528 541 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 CST2P09228 141 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 ZNF12P17014 697 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 CPT2P23786 658 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 CDAP32320 146 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 AQP2P41181 271 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 SLC6A9P48067 706 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 ARHGDIAP52565 204 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 MTPNP58546 118 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 IL13RA1P78552 427 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 TNFAIP6P98066 277 aaPredicted RBP12.35□□□□□ -0.43
PCCB-219ENST00000494742 CDK5R2Q13319 367 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 SGCAQ16586 387 aa12.35□□□□□ -0.43
PCCB-219ENST00000494742 MTX3Q5HYI7 312 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms