RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 FRMPD2BQ6IN97 320 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 TRIM40Q6P9F5 258 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 LRRC74BQ6ZQY2 392 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 ASCL5Q7RTU5 278 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 H2BFWTQ7Z2G1 175 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 ZNF429Q86V71 674 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 SLC22A9Q8IVM8 553 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 PUSL1Q8N0Z8 303 aaKnown RBP2.9□□□□□ -1.95
SMC4-224ENST00000494612 OR4F15Q8NGB8 312 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 DTX3LQ8TDB6 740 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 NT5C3BQ969T7 300 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 ZNF799Q96GE5 643 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 IFT74Q96LB3 600 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 OR8B4Q96RC9 309 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 SORT1Q99523 831 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 RIOK2Q9BVS4 552 aaKnown RBP2.9□□□□□ -1.95
SMC4-224ENST00000494612 FAIM2Q9BWQ8 316 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 MYOZ2Q9NPC6 264 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 SPATA7Q9P0W8 599 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 RABL2AQ9UBK7 228 aaPredicted RBP2.9□□□□□ -1.95
SMC4-224ENST00000494612 TRMT112Q9UI30 125 aaKnown RBP2.9□□□□□ -1.95
SMC4-224ENST00000494612 IGKV6D-21A0A0A0MT36 114 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 PSTPIP1O43586 416 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 C1orf105O95561 183 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 SLC25A27O95847 323 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 PCCAP05165 728 aaPredicted RBP2.89□□□□□ -1.95
SMC4-224ENST00000494612 PSG2P11465 335 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 HPGDP15428 266 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 SLC26A3P40879 764 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 ACTR3P61158 418 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 ERVK-25P63136 954 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 GNMTQ14749 295 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 GPNMBQ14956 572 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 DGUOKQ16854 277 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 RFX4Q33E94 735 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 ZBED5Q49AG3 693 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 HSP90AB3PQ58FF7 597 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 PRAMEF5Q5TYX0 476 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 PRAMEF6Q5VXH4 476 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 Q6ZVH6 145 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 PSTKQ8IV42 348 aaKnown RBP2.89□□□□□ -1.95
SMC4-224ENST00000494612 DEFB123Q8N688 67 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 OR4F6Q8NGB9 312 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 AKR7LQ8NHP1 331 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 SLC22A8Q8TCC7 542 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 SDR42E1Q8WUS8 393 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 FGF14Q92915 247 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 TUBGCP3Q96CW5 907 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 DNAJC19Q96DA6 116 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 CFAP53Q96M91 514 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 CHRDL1Q9BU40 450 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 KLHL28Q9NXS3 571 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 NUFIP1Q9UHK0 495 aaKnown RBP2.89□□□□□ -1.95
SMC4-224ENST00000494612 GNPTGQ9UJJ9 305 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 KDM3BQ7LBC6 1761 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 SCN9AQ15858 1988 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 PSME4Q14997 1843 aa2.89□□□□□ -1.95
SMC4-224ENST00000494612 COL4A4P53420 1690 aaPredicted RBP2.88□□□□□ -1.95
SMC4-224ENST00000494612 PHF3Q92576 2039 aaKnown RBP2.88□□□□□ -1.95
SMC4-224ENST00000494612 A0A1W2PPV9 198 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 CCDC169A6NNP5 214 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 C11orf94C9JXX5 98 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 GOSR2O14653 212 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 GKN3PP0CG01 181 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 CRISP2P16562 243 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 EIF2S2P20042 333 aaKnown RBP2.88□□□□□ -1.95
SMC4-224ENST00000494612 TCN1P20061 433 aaPredicted RBP2.88□□□□□ -1.95
SMC4-224ENST00000494612 CMA1P23946 247 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 GDI1P31150 447 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 FDFT1P37268 417 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 CSNK1DP48730 415 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 ENPEPQ07075 957 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 ZNF77Q15935 545 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 GUCA2BQ16661 112 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 CTSL3PQ5NE16 218 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 COX15Q7KZN9 410 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 RUFY3Q7L099 469 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 CDH26Q8IXH8 852 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 ZADH2Q8N4Q0 377 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 OR2L3Q8NG85 312 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 RNF139Q8WU17 664 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 SGK3Q96BR1 496 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 NIPAL2Q9H841 368 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 VPS37BQ9H9H4 285 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 MRPL47Q9HD33 250 aaKnown RBP2.88□□□□□ -1.95
SMC4-224ENST00000494612 NT5MQ9NPB1 228 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 GLRX2Q9NS18 164 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 ETNK2Q9NVF9 386 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 PCYOX1Q9UHG3 505 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 PEX16Q9Y5Y5 336 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 MYO3BQ8WXR4 1341 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 FANCIQ9NVI1 1328 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 UNC80Q8N2C7 3258 aa2.88□□□□□ -1.95
SMC4-224ENST00000494612 A0A0C4DFX4 3053 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 LAMB1P07942 1786 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 IGKV1D-13A0A0B4J2D9 117 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 FAM240BA0A1B0GVZ2 78 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 CCDC182A6NF36 153 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 SGK1O00141 431 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 LAD1O00515 517 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms