RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 GPR171O14626 319 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 IMPA2O14732 288 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 SLC16A6O15403 523 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 ARHGEF9O43307 516 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 TRAF3IP2O43734 574 aaPredicted RBP10.69□□□□□ -0.7
UPF3A-210ENST00000493727 IDH3BO43837 385 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 CLIC3O95833 236 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 TGM6O95932 706 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 IGHMP01871 453 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 APEHP13798 732 aaKnown RBP10.69□□□□□ -0.7
UPF3A-210ENST00000493727 CD53P19397 219 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 ACVR1BP36896 505 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 CD79BP40259 229 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 BIDP55957 195 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 RAP1BP61224 184 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 RAP1AP62834 184 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 ADARB1P78563 741 aaKnown RBP10.69□□□□□ -0.7
UPF3A-210ENST00000493727 CDK5Q00535 292 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 IL5RAQ01344 420 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 IL18R1Q13478 541 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 ACSM5Q6NUN0 579 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 CLEC9AQ6UXN8 241 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 C8orf59Q8N0T1 100 aaPredicted RBP10.69□□□□□ -0.7
UPF3A-210ENST00000493727 LNX2Q8N448 690 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 CNEP1R1Q8N9A8 125 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 OR4K13Q8NH42 304 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 ASB10Q8WXI3 467 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 TFAP2CQ92754 450 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 Q96M85 177 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 GP6Q9HCN6 339 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 FANCFQ9NPI8 374 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 GLRX2Q9NS18 164 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 MED29Q9NX70 200 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 NDRG4Q9ULP0 352 aaKnown RBP10.69□□□□□ -0.7
UPF3A-210ENST00000493727 NOSIPQ9Y314 301 aaKnown RBP10.69□□□□□ -0.7
UPF3A-210ENST00000493727 ROS1P08922 2347 aa10.69□□□□□ -0.7
UPF3A-210ENST00000493727 LOC102725191A0A1B0GVB3 256 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 A0A1W2PPR1 153 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 ZNF716A6NP11 495 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 FAM171A2A8MVW0 826 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 M0R129 80 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 ARPC3O15145 178 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 SURF4O15260 269 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 RENP00797 406 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 IGHG1P01857 330 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 RNASE1P07998 156 aaKnown RBP10.68□□□□□ -0.7
UPF3A-210ENST00000493727 HIST1H1CP16403 213 aaKnown RBP10.68□□□□□ -0.7
UPF3A-210ENST00000493727 PAICSP22234 425 aaKnown RBP10.68□□□□□ -0.7
UPF3A-210ENST00000493727 SLC16A1P53985 500 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 CLRN1P58418 232 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.68□□□□□ -0.7
UPF3A-210ENST00000493727 CD47Q08722 323 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 PDK3Q15120 406 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 ZNF691Q5VV52 312 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 CARD17Q5XLA6 110 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 C12orf73Q69YU5 71 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 NIPAL3Q6P499 406 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 LEG1Q6P5S2 330 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 PTCHD4Q6ZW05 846 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 CREB3L2Q70SY1 520 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 FAM122BQ7Z309 247 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 ADCK1Q86TW2 530 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 ARIH2OSQ8N7S6 290 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 TCEANCQ8N8B7 351 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 SDR9C7Q8NEX9 313 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 OR52E2Q8NGJ4 325 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 PIGTQ969N2 578 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 STARD4Q96DR4 205 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 GMPPAQ96IJ6 420 aaPredicted RBP10.68□□□□□ -0.7
UPF3A-210ENST00000493727 TXNDC15Q96J42 360 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 CNBD2Q96M20 576 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 ADAD1Q96M93 576 aaKnown RBP10.68□□□□□ -0.7
UPF3A-210ENST00000493727 MED18Q9BUE0 208 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 EMC6Q9BV81 110 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 EMC9Q9Y3B6 208 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 FLVCR1Q9Y5Y0 555 aa10.68□□□□□ -0.7
UPF3A-210ENST00000493727 IGKV3D-15A0A087WSY6 115 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 ZNF724A8MTY0 619 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 H7C1C5 153 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 M0R3G1 203 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 TLX2O43763 284 aaPredicted RBP10.67□□□□□ -0.7
UPF3A-210ENST00000493727 MPZL2O60487 215 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 SLC43A1O75387 559 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 MRPL33O75394 65 aaKnown RBP10.67□□□□□ -0.7
UPF3A-210ENST00000493727 SLC2A10O95528 541 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 TXNDC12O95881 172 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 YES1P07947 543 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 LCN6P62502 163 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 SIRPAP78324 504 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 CAMK2DQ13557 499 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 MESTQ5EB52 335 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 KRT80Q6KB66 452 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 VWA1Q6PCB0 445 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 AAED1Q7RTV5 226 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 CXorf67Q86X51 503 aaPredicted RBP10.67□□□□□ -0.7
UPF3A-210ENST00000493727 TUSC5Q8IXB3 177 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 LRRC75A-AS1Q8N1F1 130 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 FAM169BQ8N8A8 192 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 SYT14Q8NB59 555 aa10.67□□□□□ -0.7
UPF3A-210ENST00000493727 ZNF519Q8TB69 540 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms