RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 MRPS33Q9Y291 106 aaKnown RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 YBX2Q9Y2T7 364 aaKnown RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 A0A0B4J2E0 115 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 A0A1B0GX12 115 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 TVP23AA6NH52 213 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ELOA3DA6NLF2 546 aaPredicted RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 LRP3O75074 770 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 CD5P06127 495 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 FCGR3AP08637 254 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 TACSTD2P09758 323 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ADAM8P78325 824 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 HTRA3P83110 453 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 NAAAQ02083 359 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ARHGAP19Q14CB8 494 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ELOA3BQ3SY89 546 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 AWAT1Q58HT5 328 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 EXOSC6Q5RKV6 272 aaKnown RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ELOA3Q8NG57 546 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 SLAMF9Q96A28 289 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 MRGPRFQ96AM1 343 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 MARS2Q96GW9 593 aaKnown RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 MEGF10Q96KG7 1140 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 LINC00615Q96LM1 132 aaPredicted RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 OCSTAMPQ9BR26 566 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 PARP12Q9H0J9 701 aaKnown RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 MYOZ1Q9NP98 299 aaPredicted RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 APOBEC3BQ9UH17 382 aaKnown RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 OR4C45A6NMZ5 311 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 NPIPB9F8W1W9 429 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 M0R036 132 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 LATO43561 262 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 SLC34A2O95436 690 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 HLA-GP17693 338 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 CCKBRP32239 447 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 HSD17B2P37059 387 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 PPICP45877 212 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ZIC1Q15915 447 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 MOGAT2Q3SYC2 334 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 SLC22A6Q4U2R8 563 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 DRAM2Q6UX65 266 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 SLC25A42Q86VD7 318 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 NUS1Q96E22 293 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ZDHHC12Q96GR4 267 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 PCBD2Q9H0N5 130 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 FN3KRPQ9HA64 309 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 SRA1Q9HD15 236 aaKnown RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ZDHHC4Q9NPG8 344 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 LOC100289279A0A1B0GTE1 492 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 A0A1W2PRU2 124 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 TMEM235A6NFC5 223 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 C1QTNF3-AMACRE9PGA6 284 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 GLP1RP43220 463 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 RAB11BQ15907 218 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 LEG1Q6P5S2 330 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 NRSN1Q8IZ57 195 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 LRRC25Q8N386 305 aaPredicted RBP10.58□□□□□ -0.72
HDAC4-210ENST00000493582 OR2G2Q8NGZ5 317 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 SMIM8Q96KF7 97 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 SYT4Q9H2B2 425 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 KLK13Q9UKR3 277 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 TIMM10BQ9Y5J6 103 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 EML5Q05BV3 1969 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 MFNGO00587 321 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 SPINT1O43278 529 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 TGM5O43548 720 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 DNAJB6O75190 326 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 CYBAP13498 195 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 NDUFB7P17568 137 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 CDKN2AP42771 156 aaKnown RBP10.58□□□□□ -0.72
HDAC4-210ENST00000493582 GSK3AP49840 483 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 RIDAP52758 137 aaKnown RBP10.58□□□□□ -0.72
HDAC4-210ENST00000493582 ARRDC1Q8N5I2 433 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 COX18Q8N8Q8 333 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 AKR7LQ8NHP1 331 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 PHOSPHO2Q8TCD6 241 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 GPR148Q8TDV2 347 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 TSEN15Q8WW01 171 aaKnown RBP10.58□□□□□ -0.72
HDAC4-210ENST00000493582 PPP1R14AQ96A00 147 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 RAB3CQ96E17 227 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 GPR34Q9UPC5 381 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 ENTPD2Q9Y5L3 495 aa10.58□□□□□ -0.72
HDAC4-210ENST00000493582 SNRNP200O75643 2136 aaKnown RBP10.58□□□□□ -0.72
HDAC4-210ENST00000493582 TRBV5-7A0A0A0MS05 114 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 FAM157AC9JC47 383 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 DCTN6O00399 190 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 MBTPS2O43462 519 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 FBXO24O75426 580 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 GLCEO94923 617 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 AGR2O95994 175 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 CEBPEQ15744 281 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 NRROSQ86YC3 692 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 PRSS35Q8N3Z0 413 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 GVQW1Q8N7I0 195 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 ADAMTS17Q8TE56 1095 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 NKD1Q969G9 470 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 ZNF514Q96K75 400 aaPredicted RBP10.57□□□□□ -0.72
HDAC4-210ENST00000493582 TOX2Q96NM4 488 aa10.57□□□□□ -0.72
HDAC4-210ENST00000493582 ELF4Q99607 663 aaPredicted RBP10.57□□□□□ -0.72
HDAC4-210ENST00000493582 PIGQQ9BRB3 760 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms