RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 C10orf107Q8IVU9 208 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF595Q8IYB9 648 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 CLECL1Q8IZS7 167 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF619Q8N2I2 560 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ABHD12Q8N2K0 398 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 METTL4Q8N3J2 472 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 POMGNT2Q8NAT1 580 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ZFP62Q8NB50 900 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 FAM83FQ8NEG4 500 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 TRPV3Q8NET8 790 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ATP6V1C2Q8NEY4 427 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 OR5D16Q8NGK9 328 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 OR2AJ1Q8NGZ0 328 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 STAG3L4Q8TBR4 150 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 FAM57AQ8TBR7 257 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 C16orf78Q8WTQ4 265 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 RIT1Q92963 219 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 HGDQ93099 445 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ADIPOR1Q96A54 375 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 LRRC39Q96DD0 335 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 CMTM7Q96FZ5 175 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 RMND5BQ96G75 393 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ZNF681Q96N22 645 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 FAM111AQ96PZ2 611 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 EFCAB11Q9BUY7 163 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 FNDC11Q9BVV2 318 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 UGT2B28Q9BY64 529 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 C20orf27Q9GZN8 174 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 OPN3Q9H1Y3 402 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 PPIL3Q9H2H8 161 aaKnown RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 DPAGT1Q9H3H5 408 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 DSN1Q9H410 356 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 CXorf21Q9HAI6 301 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 FOLH1BQ9HBA9 442 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 POPDC3Q9HBV1 291 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 SH2D2AQ9NP31 389 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 GIMAP4Q9NUV9 329 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 MED11Q9P086 117 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 C6orf203Q9P0P8 240 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 B3GAT1Q9P2W7 334 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 CELA1Q9UNI1 258 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 KLF13Q9Y2Y9 288 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-218ENST00000493430 GRIP1Q9Y3R0 1128 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 L3MBTL1Q9Y468 752 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 MMACHCQ9Y4U1 282 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 CCL27Q9Y4X3 112 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 SNX5Q9Y5X3 404 aa2.47□□□□□ -2.01
PTCD3-218ENST00000493430 ZANQ9Y493 2812 aa2.46□□□□□ -2.01
PTCD3-218ENST00000493430 LOC105371242A0A075B767 164 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 A0A087WUV0 522 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 TRGV5A0A0B4J1U4 118 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 GOLGA8QA0A0J9YX86 632 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 A0A1B0GUH1 482 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 C2orf92A0A1B0GVN3 265 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 GNG14A0A1W2PPG7 69 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 GOLGA8OA6NCC3 632 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 CLDN24A6NM45 220 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 A8MXE2 369 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 A8MXK9 166 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 GOLGA8NF8WBI6 632 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 H0YIV9 168 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 TXNDC9O14530 226 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ADAM20O43506 726 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 TSPAN2O60636 221 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 PLIN3O60664 434 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 RAMP1O60894 148 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 SMIM24O75264 130 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 TRIM3O75382 744 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 REM1O75628 298 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 AQP8O94778 261 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 P04436 131 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 FOLR2P14207 255 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 GP9P14770 177 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ATP6V1B1P15313 513 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 SDC1P18827 310 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 CCNA2P20248 432 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 BGNP21810 368 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 PTPN6P29350 595 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 CRABP2P29373 138 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ALDH3A1P30838 453 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 CASP3P42574 277 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ZFP36L2P47974 494 aaKnown RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 HNMTP50135 292 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF41P51814 821 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 IST1P53990 364 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 CLDN18P56856 261 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 HSD17B7P56937 341 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 RELAQ04206 551 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 C2orf80Q0P641 193 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 TOMM34Q15785 309 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 DUSP5Q16690 384 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 WHAMMP3Q1A5X7 153 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 EXOC3L2Q2M3D2 409 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ATP6AP1LQ52LC2 224 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 RFTN2Q52LD8 501 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 PAGE2BQ5JRK9 111 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.46□□□□□ -2.02
PTCD3-218ENST00000493430 SLC48A1Q6P1K1 146 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 ZYG11AQ6WRX3 759 aa2.46□□□□□ -2.02
PTCD3-218ENST00000493430 FRRS1Q6ZNA5 592 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms