RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ELMOD3Q96FG2 381 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 TIMD4Q96H15 378 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 DIRC2Q96SL1 478 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 EGLN1Q9GZT9 426 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 ELOVL3Q9HB03 270 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 FGFR1OP2Q9NVK5 253 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 HIF1ANQ9NWT6 349 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 A4GNTQ9UNA3 340 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 IGHV1-69-2A0A0G2JMI3 117 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 C12orf71A8MTZ7 269 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 CCDC22O60826 627 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 SHOX2O60902 331 aaPredicted RBP10.64□□□□□ -0.71
COL6A1-205ENST00000492851 RP2O75695 350 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 SLC2A10O95528 541 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 CLPTM1O96005 669 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 CST2P09228 141 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 GAAP10253 952 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 ZNF32P17041 273 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 MAGEB1P43366 347 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 ZNF81P51508 661 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 CTXN1P60606 82 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 CCL8P80075 99 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 PRKCDQ05655 676 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 MBNL2Q5VZF2 373 aaKnown RBP10.64□□□□□ -0.71
COL6A1-205ENST00000492851 ACSM5Q6NUN0 579 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 ZER1Q7Z7L7 766 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 OFCC1Q8IZS5 231 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 ICA1LQ8NDH6 482 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 ZFAND2BQ8WV99 257 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 GEMIN6Q8WXD5 167 aaKnown RBP10.64□□□□□ -0.71
COL6A1-205ENST00000492851 NSMAFQ92636 917 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 YIPF5Q969M3 257 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 NABP1Q96AH0 204 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 NMD3Q96D46 503 aaKnown RBP10.64□□□□□ -0.71
COL6A1-205ENST00000492851 POM121L2Q96KW2 1035 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 OR51B6Q9H340 312 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 EFCAB1Q9HAE3 211 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 SAP30LQ9HAJ7 183 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 ZDHHC8Q9ULC8 765 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 NDRG4Q9ULP0 352 aaKnown RBP10.64□□□□□ -0.71
COL6A1-205ENST00000492851 UGT2A1Q9Y4X1 527 aa10.64□□□□□ -0.71
COL6A1-205ENST00000492851 C5orf49A4QMS7 147 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 EFCAB9A8MZ26 197 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 CLDN25C9JDP6 229 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 GSTA4O15217 222 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 ICMTO60725 284 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 SASH3O75995 380 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 CDAP32320 146 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 PSG4Q00888 419 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 ALKBH6Q3KRA9 238 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 HSP90B2PQ58FF3 399 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 SHQ1Q6PI26 577 aaKnown RBP10.63□□□□□ -0.71
COL6A1-205ENST00000492851 FKBP9P1Q75LS8 142 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 PEG10Q86TG7 708 aaKnown RBP10.63□□□□□ -0.71
COL6A1-205ENST00000492851 CYP4Z1Q86W10 505 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 TREML1Q86YW5 311 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 FAM156AQ8NDB6 213 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 ACOT11Q8WXI4 607 aaPredicted RBP10.63□□□□□ -0.71
COL6A1-205ENST00000492851 LRRC37BQ96QE4 947 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 ANKRD19PQ9H560 264 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 CCDC134Q9H6E4 229 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 TREM2Q9NZC2 230 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 GRHPRQ9UBQ7 328 aa10.63□□□□□ -0.71
COL6A1-205ENST00000492851 SVEP1Q4LDE5 3571 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 RTTNQ86VV8 2226 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 CXCR6O00574 342 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 XKRYO14609 159 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 CDC14BO60729 498 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 NCR1O76036 304 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 ZNF682O95780 498 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 COX5BP10606 129 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 MSR1P21757 451 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 GATA3P23771 443 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 LAP3P28838 519 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 ERVS71-1P61550 626 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 LMO4P61968 165 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 ERVK-25P63136 954 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 LIPEQ05469 1076 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 TOP3AQ13472 1001 aaPredicted RBP10.62□□□□□ -0.71
COL6A1-205ENST00000492851 IFI44LQ53G44 452 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 FAHD2BQ6P2I3 314 aaPredicted RBP10.62□□□□□ -0.71
COL6A1-205ENST00000492851 ZNF730Q6ZMV8 503 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 RINLQ6ZS11 566 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 FOXL2NBQ6ZUU3 175 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 TMPRSS11FQ6ZWK6 438 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 MBOAT2Q6ZWT7 520 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 CBLL1Q75N03 491 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 NRMQ8IXM6 262 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 SLC15A3Q8IY34 581 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 OR51A7Q8NH64 312 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 KLF14Q8TD94 323 aaPredicted RBP10.62□□□□□ -0.71
COL6A1-205ENST00000492851 FAHD2AQ96GK7 314 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 MARS2Q96GW9 593 aaKnown RBP10.62□□□□□ -0.71
COL6A1-205ENST00000492851 COG8Q96MW5 612 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 TSPAN32Q96QS1 320 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 OR2H1Q9GZK4 316 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 OCEL1Q9H607 264 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 NARFLQ9H6Q4 476 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 ZNF665Q9H7R5 613 aa10.62□□□□□ -0.71
COL6A1-205ENST00000492851 TMEM5Q9Y2B1 443 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms