RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	ADGRL4	Q9HBW9	690 aa		2.56	□□□□□ -2
VPS36-205	ENST00000492650	ACP6	Q9NPH0	428 aa		2.56	□□□□□ -2
VPS36-205	ENST00000492650	ELOVL2	Q9NXB9	296 aa		2.56	□□□□□ -2
VPS36-205	ENST00000492650	CTSZ	Q9UBR2	303 aa		2.56	□□□□□ -2
VPS36-205	ENST00000492650	CELA1	Q9UNI1	258 aa		2.56	□□□□□ -2
VPS36-205	ENST00000492650	NTNG1	Q9Y2I2	539 aa		2.56	□□□□□ -2
VPS36-205	ENST00000492650	MRPS18C	Q9Y3D5	142 aa	Known RBP	2.56	□□□□□ -2
VPS36-205	ENST00000492650	SAGE2P	A6NJ88	616 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	SMIM23	A6NLE4	172 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	VSTM2B	A6NLU5	285 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650		H7C0C1	242 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	DCTN6	O00399	190 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	CCL21	O00585	134 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	PLPP1	O14494	284 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	DYNC1I1	O14576	645 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	SGCE	O43556	437 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	PSIP1	O75475	530 aa	Known RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	EED	O75530	441 aa	Known RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	ADAP1	O75689	374 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	CLIC3	O95833	236 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	NUDT14	O95848	222 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	FGG	P02679	453 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	RET	P07949	1114 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	RHOC	P08134	193 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	RPSA	P08865	295 aa	Known RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	WNT2	P09544	360 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	OR1E1	P30953	314 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	CALCR	P30988	508 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	EPHX2	P34913	555 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	ARR3	P36575	388 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	PTGDS	P41222	190 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	CSNK1D	P48730	415 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	GDI2	P50395	445 aa	Known RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	RPL14	P50914	215 aa	Known RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	ATP4B	P51164	291 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	XK	P51811	444 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	UBE2K	P61086	200 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	C2orf80	Q0P641	193 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	FASTK	Q14296	549 aa	Known RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	CASP8	Q14790	479 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	MAD2L1BP	Q15013	274 aa	Predicted RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	FAM189A2	Q15884	450 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	SNCB	Q16143	134 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	ECSCR	Q19T08	205 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	C5orf64	Q2M2E5	130 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	NDUFAF6	Q330K2	333 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	DNAL1	Q4LDG9	190 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	CLVS2	Q5SYC1	327 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	LINC00242	Q5T6M2	205 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	FAHD1	Q6P587	224 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	LCLAT1	Q6UWP7	414 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	MAP3K15	Q6ZN16	1313 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	SSX6	Q7RTT6	188 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	EVC2	Q86UK5	1308 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	ZFAND4	Q86XD8	727 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	ZNF677	Q86XU0	584 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	TMEM25	Q86YD3	366 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	ZNF738	Q8NE65	137 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	TTL	Q8NG68	377 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	OR2Y1	Q8NGV0	311 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	OR6X1	Q8NH79	312 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	SLC7A13	Q8TCU3	470 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	PYROXD1	Q8WU10	500 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	CPNE4	Q96A23	557 aa	Predicted RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	RAB3C	Q96E17	227 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	CNRIP1	Q96F85	164 aa	Predicted RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	SEC22A	Q96IW7	307 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	ITCH	Q96J02	903 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	OR8B4	Q96RC9	309 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	TBX15	Q96SF7	602 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	MAP3K5	Q99683	1374 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	DCUN1D5	Q9BTE7	237 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	RSG1	Q9BU20	258 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	ZNF426	Q9BUY5	554 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	CDHR2	Q9BYE9	1310 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	HOXD1	Q9GZZ0	328 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	CHRNA10	Q9GZZ6	450 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	NXF3	Q9H4D5	531 aa	Known RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	RNF41	Q9H4P4	317 aa	Predicted RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	CWH43	Q9H720	699 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	ELL3	Q9HB65	397 aa	Predicted RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	AGPAT4	Q9NRZ5	378 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	C1orf109	Q9NX04	203 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	USE1	Q9NZ43	259 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	IL37	Q9NZH6	218 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	WARS2	Q9UGM6	360 aa	Known RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	APOBEC3B	Q9UH17	382 aa	Known RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	LGALS13	Q9UHV8	139 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	RPL36	Q9Y3U8	105 aa	Known RBP	2.55	□□□□□ -2
VPS36-205	ENST00000492650	AUP1	Q9Y679	476 aa		2.55	□□□□□ -2
VPS36-205	ENST00000492650	CNTNAP1	P78357	1384 aa		2.54	□□□□□ -2
VPS36-205	ENST00000492650	TTC21A	Q8NDW8	1320 aa		2.54	□□□□□ -2
VPS36-205	ENST00000492650		A0A0A6YYD5	115 aa		2.54	□□□□□ -2
VPS36-205	ENST00000492650	TRBV5-4	A0A0C4DH59	114 aa		2.54	□□□□□ -2
VPS36-205	ENST00000492650	USP27X	A6NNY8	438 aa		2.54	□□□□□ -2
VPS36-205	ENST00000492650	SHISA9	B4DS77	424 aa		2.54	□□□□□ -2
VPS36-205	ENST00000492650	NPIPB9	F8W1W9	429 aa		2.54	□□□□□ -2
VPS36-205	ENST00000492650		H0YHG0	523 aa		2.54	□□□□□ -2
VPS36-205	ENST00000492650	CDC7	O00311	574 aa		2.54	□□□□□ -2
VPS36-205	ENST00000492650	SLC9A3R1	O14745	358 aa	Predicted RBP	2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms