RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 GK3PQ14409 553 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 SCGB2B2Q4G0G5 96 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 HES5Q5TA89 166 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 CFAP77Q6ZQR2 320 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF367Q7RTV3 350 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 SLC16A14Q7RTX9 510 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 SPARTQ8N0X7 666 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 ZFP41Q8N8Y5 198 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 DTX3Q8N9I9 347 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF511Q8NB15 262 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 OR6Q1Q8NGQ2 317 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 OR2T4Q8NH00 348 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 OR52N5Q8NH56 324 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 NEIL3Q8TAT5 605 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 SETD6Q8TBK2 473 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 CPT1CQ8TCG5 803 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 ST8SIA1Q92185 356 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 MRGPRX4Q96LA9 322 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 LURAP1Q96LR2 239 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 HIST1H2AAQ96QV6 131 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 TCEAL7Q9BRU2 100 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF649Q9BS31 505 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 METTL8Q9H825 291 aaKnown RBP4.04□□□□□ -1.76
TRA2B-215ENST00000492417 CDH20Q9HBT6 801 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 ASCL3Q9NQ33 180 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 IFT46Q9NQC8 304 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 ASF1BQ9NVP2 202 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 DNAJB12Q9NXW2 375 aaKnown RBP4.04□□□□□ -1.76
TRA2B-215ENST00000492417 FBXL3Q9UKT7 428 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 NEUROG3Q9Y4Z2 214 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 A0A0G2JMM0 328 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 A0A1W2PPB8 328 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 A0A1W2PRS3 328 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 TCRBV3S1A0A5B6 114 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 A1L4Q6 167 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 ANKUB1A6NFN9 424 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 KIR3DP1A8MWS1 328 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 PROB1E7EW31 1015 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 LYRM1O43325 122 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 CREBL2O60519 120 aaPredicted RBP4.04□□□□□ -1.76
TRA2B-215ENST00000492417 SLC43A1O75387 559 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 SLC34A2O95436 690 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 EDNRAP25101 427 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 SRD5A2P31213 254 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 ETV1P50549 477 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 DAP3P51398 398 aaKnown RBP4.04□□□□□ -1.76
TRA2B-215ENST00000492417 CLDN20P56880 219 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 SELENOVP59797 346 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 LSM11P83369 360 aaKnown RBP eCLIP4.04□□□□□ -1.76
TRA2B-215ENST00000492417 BCL2L15Q5TBC7 163 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 C22orf42Q6IC83 251 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 DHRS4L2Q6PKH6 230 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 RNF165Q6ZSG1 346 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 MBOAT2Q6ZWT7 520 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 PRSS48Q7RTY5 328 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 CCDC71Q8IV32 467 aaPredicted RBP4.04□□□□□ -1.76
TRA2B-215ENST00000492417 CADM3Q8N126 398 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 WDSUB1Q8N9V3 476 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 CHDHQ8NE62 594 aaPredicted RBP4.04□□□□□ -1.76
TRA2B-215ENST00000492417 NDNFQ8TB73 568 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 CASTOR1Q8WTX7 329 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 SLC25A43Q8WUT9 341 aaPredicted RBP4.04□□□□□ -1.76
TRA2B-215ENST00000492417 C3orf49Q96BT1 292 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 IMMP1LQ96LU5 166 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 UCN2Q96RP3 112 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 PARPBPQ9NWS1 579 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 GLTPQ9NZD2 209 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 DUSP13Q9UII6 198 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 PROCRQ9UNN8 238 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 PCDHGB5Q9Y5G0 923 aa4.04□□□□□ -1.76
TRA2B-215ENST00000492417 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 A0A1B0GVI7 797 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 A0A1W2PQL4 384 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 TMEM72A0PK05 275 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 RAB19A4D1S5 217 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 A6NLC8 198 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 GPR171O14626 319 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 DVL2O14641 736 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 SLC19A2O60779 497 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 CRTAPO75718 401 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 RAB36O95755 333 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 WT1P19544 449 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 GIPRP48546 466 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 RGS6P49758 472 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 IDH3GP51553 393 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 OR12D2P58182 307 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 RPL18Q07020 188 aaKnown RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 PMPCAQ10713 525 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 CRMP1Q14194 572 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 AKR1C8PQ5T2L2 129 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF529Q6P280 563 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 DBX2Q6ZNG2 339 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 SSX9Q7RTT3 188 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ELP5Q8TE02 316 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 UBE2FQ969M7 185 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ADIPOR1Q96A54 375 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 GIMAP5Q96F15 307 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 S100A16Q96FQ6 103 aaKnown RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF436Q9C0F3 470 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 B3GNT4Q9C0J1 378 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms