RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 IGLV3-9A0A075B6K5 115 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 TRAV20A0A0B4J274 112 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 TPST2O60704 377 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 SNAP29O95721 258 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 IGF2P01344 180 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 SAGP10523 405 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-212ENST00000492407 B4GALT1P15291 398 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF250P15622 560 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 CALB2P22676 271 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 AHCYP23526 432 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 GIPRP48546 466 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 PTDSS1P48651 473 aaKnown RBP7.83□□□□□ -1.16
HDAC3-212ENST00000492407 COMPP49747 757 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-212ENST00000492407 IDH3AP50213 366 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 PCBP3P57721 371 aaKnown RBP7.83□□□□□ -1.16
HDAC3-212ENST00000492407 MYBPC1Q00872 1141 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 TEKQ02763 1124 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 PIGFQ07326 219 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 TRIP10Q15642 601 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 RUNDC3AQ59EK9 446 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 FAM76BQ5HYJ3 339 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 CARD17Q5XLA6 110 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 UNQ6126/PRO20091Q6UXV3 157 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 RFPL4BQ6ZWI9 263 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 SLC35D2Q76EJ3 337 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 KRT74Q7RTS7 529 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 HDDC2Q7Z4H3 204 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 C10orf53Q8N6V4 93 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 C11orf65Q8NCR3 313 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 OR51F2Q8NH61 342 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 CLDND2Q8NHS1 167 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF519Q8TB69 540 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 TSPEARQ8WU66 669 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 RASSF5Q8WWW0 418 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF566Q969W8 418 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 MS4A3Q96HJ5 214 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 JMJD8Q96S16 334 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 ARHGDIGQ99819 225 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 C6orf62Q9GZU0 229 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-212ENST00000492407 PCDHAC1Q9H158 963 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 LRMDAQ9H2I8 198 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 TMBIM4Q9HC24 238 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 HIF1ANQ9NWT6 349 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 CCDC167Q9P0B6 97 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 SLAMF8Q9P0V8 285 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF229Q9UJW7 825 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 CACNG2Q9Y698 323 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 SESN1Q9Y6P5 492 aa7.83□□□□□ -1.16
HDAC3-212ENST00000492407 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.83□□□□□ -1.162e-6■■■■□ 23.5
HDAC3-212ENST00000492407 C17orf100A8MU93 164 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 J3QLI3 93 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 DHHO43323 396 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 CIDEAO60543 219 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 RP2O75695 350 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 SEC14L2O76054 403 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 SNAPINO95295 136 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 HPXP02790 462 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 MT-ND5P03915 603 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 HIST1H2ABP04908 130 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 ADORA3P0DMS8 318 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 GAAP10253 952 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 ITGA2P17301 1181 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 CBLP22681 906 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 COL8A2P25067 703 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 CRYBB2P43320 205 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF133P52736 654 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-212ENST00000492407 AQP5P55064 265 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 BIDP55957 195 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 LMO4P61968 165 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 RAB39AQ14964 217 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF74Q16587 644 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 HIST3H3Q16695 136 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 MSMPQ1L6U9 139 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 SLC36A2Q495M3 483 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 PAGE3Q5JUK9 113 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 RGS7BPQ6MZT1 257 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-212ENST00000492407 ACSM5Q6NUN0 579 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 TTC33Q6PID6 262 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-212ENST00000492407 LRFN4Q6PJG9 635 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 DLEU7Q6UYE1 221 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 C12orf54Q6X4T0 127 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 IDO2Q6ZQW0 420 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 HIST3H2AQ7L7L0 130 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 PATL1Q86TB9 770 aaKnown RBP7.82□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF584Q8IVC4 421 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 SKA3Q8IX90 412 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 DPP10Q8N608 796 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 SYNPRQ8TBG9 265 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 FANK1Q8TC84 345 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF418Q8TF45 676 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-212ENST00000492407 FAM216AQ8WUB2 273 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 C11orf40Q8WZ69 217 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 HIST1H2ACQ93077 130 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 ZMYND19Q96E35 227 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-212ENST00000492407 SEPHS2Q99611 448 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 MCHR1Q99705 422 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF426Q9BUY5 554 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 BCL2L14Q9BZR8 327 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 POLR2J2Q9GZM3 115 aaKnown RBP7.82□□□□□ -1.16
HDAC3-212ENST00000492407 POLR2J3Q9H1A7 115 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms