RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 B4GALT1P15291 398 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 PPP3CBP16298 524 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 MYL12AP19105 171 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 PSMB1P20618 241 aaKnown RBP9.63□□□□□ -0.87
VARS2-210ENST00000490699 COX5AP20674 150 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 IGHV1-2P23083 117 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 EEF1B2P24534 225 aaKnown RBP9.63□□□□□ -0.87
VARS2-210ENST00000490699 ENTPD1P49961 510 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 CXCR4P61073 352 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 LSM6P62312 80 aaKnown RBP9.63□□□□□ -0.87
VARS2-210ENST00000490699 ADORA2A-AS1P86434 159 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 EFNB1P98172 346 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 PLP2Q04941 152 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 SCRN3Q0VDG4 424 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 CDK5R2Q13319 367 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 AQP6Q13520 282 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 RBM48Q5RL73 367 aaKnown RBP9.63□□□□□ -0.87
VARS2-210ENST00000490699 PHYHD1Q5SRE7 291 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 SFRP5Q5T4F7 317 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 P2RY8Q86VZ1 359 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 ALDH16A1Q8IZ83 802 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 GABRG1Q8N1C3 465 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 ZNF433Q8N7K0 673 aaPredicted RBP9.63□□□□□ -0.87
VARS2-210ENST00000490699 RELL2Q8NC24 303 aaPredicted RBP9.63□□□□□ -0.87
VARS2-210ENST00000490699 BBS1Q8NFJ9 593 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 BPIFB6Q8NFQ5 453 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 OR1K1Q8NGR3 316 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 OR6N2Q8NGY6 317 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 RNASE6Q93091 150 aaKnown RBP9.63□□□□□ -0.87
VARS2-210ENST00000490699 PTP4A1Q93096 173 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 MYDGFQ969H8 173 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 NMD3Q96D46 503 aaKnown RBP9.63□□□□□ -0.87
VARS2-210ENST00000490699 ZMYND19Q96E35 227 aaPredicted RBP9.63□□□□□ -0.87
VARS2-210ENST00000490699 RNFT2Q96EX2 444 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 DDOQ99489 341 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 OR10A4Q9H209 315 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 NGBQ9NPG2 151 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 POLE4Q9NR33 117 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 HAO2Q9NYQ3 351 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 LAMP5Q9UJQ1 280 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 RALYQ9UKM9 306 aaKnown RBP9.63□□□□□ -0.87
VARS2-210ENST00000490699 LRRC42Q9Y546 428 aa9.63□□□□□ -0.87
VARS2-210ENST00000490699 TVP23AA6NH52 213 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 ZNF670-ZNF695F2Z2N8 137 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 DCTN6O00399 190 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 SEC14L2O76054 403 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 PTHP01270 115 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 ITGA5P08648 1049 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 CST2P09228 141 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 CCDC159P0C7I6 412 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 DBTP11182 482 aaKnown RBP9.62□□□□□ -0.87
VARS2-210ENST00000490699 CD79AP11912 226 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 SLC2A5P22732 501 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 CDAP32320 146 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 ARR3P36575 388 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 NAA10P41227 235 aaPredicted RBP9.62□□□□□ -0.87
VARS2-210ENST00000490699 NUDT6P53370 316 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 ZNF91Q05481 1191 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 RAB40BQ12829 278 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 GGTLC2Q14390 218 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 TAF13Q15543 124 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 ETFDHQ16134 617 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 C6orf141Q5SZD1 244 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 FAM27BQ5VT28 67 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 SLC18B1Q6NT16 456 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 ZNF627Q7L945 461 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 SLC16A9Q7RTY1 509 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 SYT9Q86SS6 491 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 LRRC18Q8N456 261 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 STX19Q8N4C7 294 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 ZNF540Q8NDQ6 660 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 GJC3Q8NFK1 279 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 SLC26A10Q8NG04 563 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 OR51G2Q8NGK0 314 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 IPCEF1Q8WWN9 437 aaPredicted RBP9.62□□□□□ -0.87
VARS2-210ENST00000490699 C11orf40Q8WZ69 217 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 UBE2FQ969M7 185 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 FOXN4Q96NZ1 517 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 HCAR1Q9BXC0 346 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 YTHDF1Q9BYJ9 559 aaKnown RBP9.62□□□□□ -0.87
VARS2-210ENST00000490699 YIPF3Q9GZM5 350 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 CNOT2Q9NZN8 540 aaKnown RBP9.62□□□□□ -0.87
VARS2-210ENST00000490699 JKAMPQ9P055 326 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 NDRG3Q9UGV2 375 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 COMMD3-BMI1R4GMX3 469 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 POLEQ07864 2286 aa9.62□□□□□ -0.87
VARS2-210ENST00000490699 INTS1Q8N201 2190 aaKnown RBP9.61□□□□□ -0.87
VARS2-210ENST00000490699 KALRNO60229 2985 aa9.61□□□□□ -0.87
VARS2-210ENST00000490699 A0A096LPE4 126 aa9.61□□□□□ -0.87
VARS2-210ENST00000490699 IQCMA0A1B0GVH7 501 aa9.61□□□□□ -0.87
VARS2-210ENST00000490699 A0A1W2PPZ6 126 aa9.61□□□□□ -0.87
VARS2-210ENST00000490699 SLC1A7O00341 560 aa9.61□□□□□ -0.87
VARS2-210ENST00000490699 ZNF593O00488 134 aaPredicted RBP9.61□□□□□ -0.87
VARS2-210ENST00000490699 MRPL3P09001 348 aaKnown RBP9.61□□□□□ -0.87
VARS2-210ENST00000490699 GAAP10253 952 aa9.61□□□□□ -0.87
VARS2-210ENST00000490699 PLA2G2AP14555 144 aa9.61□□□□□ -0.87
VARS2-210ENST00000490699 GABRB1P18505 474 aa9.61□□□□□ -0.87
VARS2-210ENST00000490699 EDNRAP25101 427 aa9.61□□□□□ -0.87
VARS2-210ENST00000490699 UGT2B10P36537 528 aa9.61□□□□□ -0.87
VARS2-210ENST00000490699 SORDQ00796 357 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms