RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 PLSCR3Q9NRY6 295 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF319Q9P2F9 582 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 APOBEC3BQ9UH17 382 aaKnown RBP2.42□□□□□ -2.02
UBXN4-208ENST00000490163 POFUT2Q9Y2G5 429 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 PLSCR5A0PG75 271 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 BTBD17A6NE02 478 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 LEUTXA8MZ59 168 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 E5RI56 91 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 COPEO14579 308 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 FAM189A1O60320 539 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 TDP2O95551 362 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF806P0C7X5 589 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 MAGP20916 626 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 CTNNA2P26232 953 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 CFHR2P36980 270 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 AQP2P41181 271 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 SOX3P41225 446 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 STK19P49842 368 aaPredicted RBP2.42□□□□□ -2.02
UBXN4-208ENST00000490163 NUDT2P50583 147 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 PDX1P52945 283 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 CD81P60033 236 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 PDIA2Q13087 525 aaKnown RBP2.42□□□□□ -2.02
UBXN4-208ENST00000490163 STX5Q13190 355 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 COTL1Q14019 142 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 RCAN2Q14206 197 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 ZIC1Q15915 447 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 KLHL12Q53G59 568 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 OR4C11Q6IEV9 310 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 FRMPD2BQ6IN97 320 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 TMEM64Q6YI46 380 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 LANCL3Q6ZV70 420 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF571Q7Z3V5 609 aaPredicted RBP2.42□□□□□ -2.02
UBXN4-208ENST00000490163 DEFB132Q7Z7B7 95 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 SYS1Q8N2H4 156 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 OR13C9Q8NGT0 318 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 ASB5Q8WWX0 329 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 SLC38A2Q96QD8 506 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 KLF6Q99612 283 aaPredicted RBP2.42□□□□□ -2.02
UBXN4-208ENST00000490163 KXD1Q9BQD3 176 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 MCRIP2Q9BUT9 160 aaKnown RBP2.42□□□□□ -2.02
UBXN4-208ENST00000490163 YTHDF1Q9BYJ9 559 aaKnown RBP2.42□□□□□ -2.02
UBXN4-208ENST00000490163 UCK2Q9BZX2 261 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 CAB39LQ9H9S4 337 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 TMEM216Q9P0N5 145 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 EIF3KQ9UBQ5 218 aaKnown RBP2.42□□□□□ -2.02
UBXN4-208ENST00000490163 COPS3Q9UNS2 423 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 NCANO14594 1321 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 CNTNAP1P78357 1384 aa2.42□□□□□ -2.02
UBXN4-208ENST00000490163 A0A0A6YYD5 115 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 A0A0G2JLW4 131 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 TMEM272A0A1B0GTI8 110 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 LRP5LA4QPB2 252 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 LINC00587B1AMM8 73 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 HSD17B6O14756 317 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 AIM2O14862 343 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF208O43345 1280 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 HUS1O60921 280 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF780AO75290 641 aaPredicted RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 OR2B3O76000 313 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SNAPINO95295 136 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 HPP00738 406 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 IGHV2-5P01817 119 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 CDK1P06493 297 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 FABP1P07148 127 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 TRAPPC2P0DI81 140 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 TRAPPC2BP0DI82 140 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 CNR1P21554 472 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ME2P23368 584 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 CALML3P27482 149 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 LCN1P31025 176 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 PTH2RP49190 550 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 MRPL19P49406 292 aaKnown RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 UCNP55089 124 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 GPX6P59796 221 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SRSF4Q08170 494 aaKnown RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 BTN1A1Q13410 526 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ART3Q13508 389 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 CHI3L2Q15782 390 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SGCAQ16586 387 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 HSD17B12Q53GQ0 312 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 LY6G6FQ5SQ64 297 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 FHL5Q5TD97 284 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 MORN5Q5VZ52 161 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF773Q6PK81 442 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 CREB3L2Q70SY1 520 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SNX20Q7Z614 316 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SMIM29Q86T20 159 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 COMMD7Q86VX2 200 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ZNF491Q8N8L2 437 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 MCFD2Q8NI22 146 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 C1orf54Q8WWF1 131 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ASZ1Q8WWH4 475 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 DEDD2Q8WXF8 326 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SGTBQ96EQ0 304 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 COPS4Q9BT78 406 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 POLDIP3Q9BY77 421 aaKnown RBP2.41□□□□□ -2.02
UBXN4-208ENST00000490163 HIPK2Q9H2X6 1198 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 ANKHQ9HCJ1 492 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 XPNPEP1Q9NQW7 623 aa2.41□□□□□ -2.02
UBXN4-208ENST00000490163 SLC17A7Q9P2U7 560 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms