RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 UVRAGQ9P2Y5 699 aa2.48□□□□□ -2.01
CCDC39-206ENST00000489868 CNTNAP1P78357 1384 aa2.48□□□□□ -2.01
CCDC39-206ENST00000489868 CAMTA1Q9Y6Y1 1673 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 OR52A4PA6NMU1 304 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 SOX15O60248 233 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 CCNE2O96020 404 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 OR56A5P0C7T3 313 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 CALM1P0DP23 149 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 CALM2P0DP24 149 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 CALM3P0DP25 149 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 ACTG2P63267 376 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 CHIT1Q13231 466 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 PTPN20Q4JDL3 420 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 MS4A15Q8N5U1 240 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 OR1S2Q8NGQ3 325 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 OR8U1Q8NH10 309 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 IFT74Q96LB3 600 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 ISY1Q9ULR0 285 aaKnown RBP2.47□□□□□ -2.01
CCDC39-206ENST00000489868 ST3GAL6Q9Y274 331 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 NPTNQ9Y639 398 aa2.47□□□□□ -2.01
CCDC39-206ENST00000489868 CLRN2A0PK11 232 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 ZNF850A8MQ14 1090 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 SURF6O75683 361 aaKnown RBP2.46□□□□□ -2.02
CCDC39-206ENST00000489868 APCSP02743 223 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 UBTFL6P0CB48 400 aaPredicted RBP2.46□□□□□ -2.02
CCDC39-206ENST00000489868 OPRK1P41145 380 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 HNMTP50135 292 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 GBX2P52951 348 aaPredicted RBP2.46□□□□□ -2.02
CCDC39-206ENST00000489868 ARFIP1P53367 373 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 PITPNAQ00169 270 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 MXD1Q05195 221 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 CLINT1Q14677 625 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 TAF7Q15545 349 aaPredicted RBP2.46□□□□□ -2.02
CCDC39-206ENST00000489868 RAET1LQ5VY80 246 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 LINC00304Q8N9R0 145 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 OR2L3Q8NG85 312 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 CIRBP-AS1Q8TBR5 109 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 TRIM44Q96DX7 344 aaPredicted RBP2.46□□□□□ -2.02
CCDC39-206ENST00000489868 TIMM29Q9BSF4 260 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 PARP12Q9H0J9 701 aaKnown RBP2.46□□□□□ -2.02
CCDC39-206ENST00000489868 SIGLEC9Q9Y336 463 aa2.46□□□□□ -2.02
CCDC39-206ENST00000489868 TSSC4Q9Y5U2 329 aaPredicted RBP2.46□□□□□ -2.02
CCDC39-206ENST00000489868 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.45□□□□□ -2.02
CCDC39-206ENST00000489868 PCP4L1A6NKN8 68 aa2.45□□□□□ -2.02
CCDC39-206ENST00000489868 PPP1R2P9O14990 202 aa2.45□□□□□ -2.02
CCDC39-206ENST00000489868 DPM1O60762 260 aa2.45□□□□□ -2.02
CCDC39-206ENST00000489868 YIF1AO95070 293 aa2.45□□□□□ -2.02
CCDC39-206ENST00000489868 CDRT1O95170 752 aa2.45□□□□□ -2.02
CCDC39-206ENST00000489868 CEBPDP49716 269 aaPredicted RBP2.45□□□□□ -2.02
CCDC39-206ENST00000489868 TPMTP51580 245 aa2.45□□□□□ -2.02
CCDC39-206ENST00000489868 KCNJ2P63252 427 aa2.45□□□□□ -2.02
CCDC39-206ENST00000489868 SNRNP35Q16560 246 aaKnown RBP2.45□□□□□ -2.02
CCDC39-206ENST00000489868 IMMTQ16891 758 aaKnown RBP2.45□□□□□ -2.02
CCDC39-206ENST00000489868 ZFP41Q8N8Y5 198 aa2.45□□□□□ -2.02
CCDC39-206ENST00000489868 COQ8AQ8NI60 647 aa2.45□□□□□ -2.02
CCDC39-206ENST00000489868 PLPPR1Q8TBJ4 325 aa2.45□□□□□ -2.02
CCDC39-206ENST00000489868 DOK1Q99704 481 aa2.45□□□□□ -2.02
CCDC39-206ENST00000489868 KCNJ16Q9NPI9 418 aa2.45□□□□□ -2.02
CCDC39-206ENST00000489868 ZNF816-ZNF321PA0A0X1KG74 233 aa2.44□□□□□ -2.02
CCDC39-206ENST00000489868 ZNF806P0C7X5 589 aa2.44□□□□□ -2.02
CCDC39-206ENST00000489868 TCP10Q12799 353 aa2.44□□□□□ -2.02
CCDC39-206ENST00000489868 BHLHE23Q8NDY6 225 aa2.44□□□□□ -2.02
CCDC39-206ENST00000489868 OR4K5Q8NGD3 323 aa2.44□□□□□ -2.02
CCDC39-206ENST00000489868 STMN2Q93045 179 aa2.44□□□□□ -2.02
CCDC39-206ENST00000489868 CTSFQ9UBX1 484 aa2.44□□□□□ -2.02
CCDC39-206ENST00000489868 ING4Q9UNL4 249 aa2.44□□□□□ -2.02
CCDC39-206ENST00000489868 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
CCDC39-206ENST00000489868 GPR89AB7ZAQ6 455 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 BPY2O14599 106 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 MRPS12O15235 138 aaKnown RBP2.43□□□□□ -2.02
CCDC39-206ENST00000489868 GPR89BP0CG08 455 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 C1GALT1C1LP0DN25 315 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 SLC25A11Q02978 314 aaKnown RBP2.43□□□□□ -2.02
CCDC39-206ENST00000489868 ZNF616Q08AN1 781 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 ECH1Q13011 328 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 IRF4Q15306 451 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 IGFBP7Q16270 282 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 CTSL3PQ5NE16 218 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 CCNJQ5T5M9 372 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 METTL21CQ5VZV1 264 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 Q6ZSR3 168 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 CALHM1Q8IU99 346 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 TGIF2LXQ8IUE1 241 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 EGFL6Q8IUX8 553 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 PDIK1LQ8N165 341 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 ZCCHC7Q8N3Z6 543 aaKnown RBP2.43□□□□□ -2.02
CCDC39-206ENST00000489868 EID2Q8N6I1 236 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 GATSQ8NAP1 163 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 RHEBL1Q8TAI7 183 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 LINC01560Q8TB33 94 aa2.43□□□□□ -2.02
CCDC39-206ENST00000489868 FLYWCH2Q96CP2 140 aaKnown RBP2.43□□□□□ -2.02
CCDC39-206ENST00000489868 LSM7Q9UK45 103 aaKnown RBP2.43□□□□□ -2.02
CCDC39-206ENST00000489868 COL5A1P20908 1838 aaPredicted RBP2.42□□□□□ -2.02
CCDC39-206ENST00000489868 SHANK1Q9Y566 2161 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 SOCS1O15524 211 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 IGKV4-1P06312 121 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 OR5H8P0DN80 308 aa2.42□□□□□ -2.02
CCDC39-206ENST00000489868 HNRNPH3P31942 346 aaKnown RBP2.42□□□□□ -2.02
CCDC39-206ENST00000489868 SSR1P43307 286 aaKnown RBP2.42□□□□□ -2.02
CCDC39-206ENST00000489868 CXCL12P48061 93 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms