RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 A0A1W2PPL8 197 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 MBD3L4A6NDZ8 208 aaPredicted RBP12.5□□□□□ -0.41
VPS26A-205ENST00000489656 MBD3L3A6NE82 208 aaPredicted RBP12.5□□□□□ -0.41
VPS26A-205ENST00000489656 MBD3L5A6NJ08 208 aaPredicted RBP12.5□□□□□ -0.41
VPS26A-205ENST00000489656 HSPB2A8KAH6 182 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 RPL36A-HNRNPH2H7BZ11 118 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 ZNF701M0R085 212 aaPredicted RBP12.5□□□□□ -0.41
VPS26A-205ENST00000489656 UPK3AO75631 287 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 MT-ND5P03915 603 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 PSKH1P11801 424 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 ZNF823P16415 610 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 TGFBR2P37173 567 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 LIPAP38571 399 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 ZNF84P51523 738 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 HCCSP53701 268 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 LSM6P62312 80 aaKnown RBP12.5□□□□□ -0.41
VPS26A-205ENST00000489656 ADAM8P78325 824 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 HSPB2Q16082 182 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 ARMCX4Q5H9R4 360 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 FOXB2Q5VYV0 432 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 C19orf48Q6RUI8 117 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 PLEKHG7Q6ZR37 379 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 KCTD20Q7Z5Y7 419 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 RFLNBQ8N5W9 214 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 OR10H5Q8NGA6 315 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 OR5M9Q8NGP3 310 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 MBD3L2Q8NHZ7 208 aaPredicted RBP12.5□□□□□ -0.41
VPS26A-205ENST00000489656 ZNF420Q8TAQ5 688 aaPredicted RBP12.5□□□□□ -0.41
VPS26A-205ENST00000489656 HAVCR2Q8TDQ0 301 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 SMAP2Q8WU79 429 aaPredicted RBP12.5□□□□□ -0.41
VPS26A-205ENST00000489656 SPRYD4Q8WW59 207 aaPredicted RBP12.5□□□□□ -0.41
VPS26A-205ENST00000489656 ASB17Q8WXJ9 295 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 C11orf40Q8WZ69 217 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 SNRNP40Q96DI7 357 aaKnown RBP12.5□□□□□ -0.41
VPS26A-205ENST00000489656 FOXN4Q96NZ1 517 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 TRIB1Q96RU8 372 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 TM9SF2Q99805 663 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 NELFAQ9H3P2 528 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 LAMP5Q9UJQ1 280 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 KLHDC2Q9Y2U9 406 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 PKD1L2Q7Z442 2459 aa12.5□□□□□ -0.41
VPS26A-205ENST00000489656 FIGNL2A6NMB9 653 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 ERVH48-1M5A8F1 160 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 TMCC2O75069 709 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 SULT1C4O75897 302 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 MPZL1O95297 269 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 CPEP16870 476 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 MSR1P21757 451 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 MRPS34P82930 218 aaKnown RBP12.49□□□□□ -0.41
VPS26A-205ENST00000489656 ROM1Q03395 351 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 MRPL28Q13084 256 aaKnown RBP12.49□□□□□ -0.41
VPS26A-205ENST00000489656 GPR50Q13585 617 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 TPBGQ13641 420 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 MEP1BQ16820 701 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 NRN1LQ496H8 165 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 TSPO2Q5TGU0 170 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 SLC18B1Q6NT16 456 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 VASH1Q7L8A9 365 aaPredicted RBP12.49□□□□□ -0.41
VPS26A-205ENST00000489656 LINGO2Q7L985 606 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 ANKRD13BQ86YJ7 626 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 GATAD2BQ8WXI9 593 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 NABP1Q96AH0 204 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 APH1AQ96BI3 265 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 DGCR14Q96DF8 476 aaKnown RBP12.49□□□□□ -0.41
VPS26A-205ENST00000489656 C4orf36Q96KX1 117 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 DOK1Q99704 481 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 BCL7BQ9BQE9 202 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 TTYH2Q9BSA4 534 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 ISG20L2Q9H9L3 353 aaKnown RBP12.49□□□□□ -0.41
VPS26A-205ENST00000489656 GPR35Q9HC97 309 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 BABAM2Q9NXR7 383 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 CYB5R1Q9UHQ9 305 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 CLEC4AQ9UMR7 237 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 ZNF835Q9Y2P0 537 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 ACACBO00763 2458 aa12.49□□□□□ -0.41
VPS26A-205ENST00000489656 ITPR1Q14643 2758 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 H3BSA7 217 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 CCRL2O00421 344 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 ZNHIT1O43257 154 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 ABHD16AO95870 558 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 LALBAP00709 142 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 CRHP06850 196 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 TPOP07202 933 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 SPARCP09486 303 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 HSMCR30P0CW71 290 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 CD36P16671 472 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 NPR2P20594 1047 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 GUCA1AP43080 201 aaPredicted RBP12.48□□□□□ -0.41
VPS26A-205ENST00000489656 OR3A2P47893 321 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 RGS6P49758 472 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 TMBIM6P55061 237 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 OR12D2P58182 307 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 TAS2R43P59537 309 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 EIF2S3LQ2VIR3 472 aaKnown RBP12.48□□□□□ -0.41
VPS26A-205ENST00000489656 C1orf185Q5T7R7 199 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 ZNF585AQ6P3V2 769 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 KCTD18Q6PI47 426 aaPredicted RBP12.48□□□□□ -0.41
VPS26A-205ENST00000489656 ZNF627Q7L945 461 aa12.48□□□□□ -0.41
VPS26A-205ENST00000489656 NUFIP2Q7Z417 695 aaKnown RBP12.48□□□□□ -0.41
VPS26A-205ENST00000489656 CD163Q86VB7 1156 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms