RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 TP53I3Q53FA7 332 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 GPR107Q5VW38 600 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 SLC18B1Q6NT16 456 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 RPTNQ6XPR3 784 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 LINGO2Q7L985 606 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 CD163Q86VB7 1156 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 ZNF100Q8IYN0 542 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 C9orf106Q8NAJ2 232 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 CPT1CQ8TCG5 803 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 THEM6Q8WUY1 208 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 C4orf36Q96KX1 117 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 ALKBH3Q96Q83 286 aaPredicted RBP18.43■□□□□ 0.54
SND1-214ENST00000489417 CRLF2Q9HC73 371 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 GPR35Q9HC97 309 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 EMC7Q9NPA0 242 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 ASF1BQ9NVP2 202 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 ALPK2Q86TB3 2170 aa18.43■□□□□ 0.54
SND1-214ENST00000489417 FIGNL2A6NMB9 653 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 TGFBR2P37173 567 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 CAPZA2P47755 286 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 ACSM1Q08AH1 577 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 EIF2B1Q14232 305 aaKnown RBP18.42■□□□□ 0.54
SND1-214ENST00000489417 SGCAQ16586 387 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 OR2A2Q6IF42 318 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 PLEKHG7Q6ZR37 379 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 VASH1Q7L8A9 365 aaPredicted RBP18.42■□□□□ 0.54
SND1-214ENST00000489417 KLBQ86Z14 1044 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 ASB17Q8WXJ9 295 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 TM9SF2Q99805 663 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 TTYH2Q9BSA4 534 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 CDADC1Q9BWV3 514 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 SLC7A10Q9NS82 523 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 BABAM2Q9NXR7 383 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 CHD8Q9HCK8 2581 aa18.42■□□□□ 0.54
SND1-214ENST00000489417 CCDC160A6NGH7 325 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 PRR32B1ATL7 298 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 MAGEB4O15481 346 aaPredicted RBP18.41■□□□□ 0.54
SND1-214ENST00000489417 TMCC2O75069 709 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 LALBAP00709 142 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 CD36P16671 472 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 MSR1P21757 451 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 MRPS34P82930 218 aaKnown RBP18.41■□□□□ 0.54
SND1-214ENST00000489417 ROR2Q01974 943 aaKnown RBP18.41■□□□□ 0.54
SND1-214ENST00000489417 EGR3Q06889 387 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 GUSBP1Q15486 140 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 CEACAM16Q2WEN9 425 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 ZNF684Q5T5D7 378 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 C1orf185Q5T7R7 199 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 GFRALQ6UXV0 394 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 LINC00346Q8IVM7 164 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 HTRA1Q92743 480 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 ZNF837Q96EG3 531 aaPredicted RBP18.41■□□□□ 0.54
SND1-214ENST00000489417 AMELYQ99218 206 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 FUNDC2Q9BWH2 189 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 NELFAQ9H3P2 528 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 GNG8Q9UK08 70 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 POLR1DQ9Y2S0 133 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 LAMA5O15230 3695 aa18.41■□□□□ 0.54
SND1-214ENST00000489417 MBD3L4A6NDZ8 208 aaPredicted RBP18.4■□□□□ 0.54
SND1-214ENST00000489417 MBD3L3A6NE82 208 aaPredicted RBP18.4■□□□□ 0.54
SND1-214ENST00000489417 MBD3L5A6NJ08 208 aaPredicted RBP18.4■□□□□ 0.54
SND1-214ENST00000489417 ERVH48-1M5A8F1 160 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 CCRL2O00421 344 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 IGHV3-9P01782 118 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 HOXD4P09016 255 aaPredicted RBP18.4■□□□□ 0.54
SND1-214ENST00000489417 RGS6P49758 472 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 LSM6P62312 80 aaKnown RBP18.4■□□□□ 0.54
SND1-214ENST00000489417 BDH1Q02338 343 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 STK11Q15831 433 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 GCNT2Q8N0V5 402 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 MBD3L2Q8NHZ7 208 aaPredicted RBP18.4■□□□□ 0.54
SND1-214ENST00000489417 NABP1Q96AH0 204 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 ABHD6Q9BV23 337 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 C12orf49Q9H741 205 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 TRIM36Q9NQ86 728 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 TMEM38BQ9NVV0 291 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 UPB1Q9UBR1 384 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 EMC9Q9Y3B6 208 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 METTL15A6NJ78 407 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 ZNF587BE7ETH6 402 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 KRT8P05787 483 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 OR8G3PP0DMU2 310 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 CPEP16870 476 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 OR3A2P47893 321 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 GBX2P52951 348 aaPredicted RBP18.4■□□□□ 0.54
SND1-214ENST00000489417 SIRPAP78324 504 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 TPBGQ13641 420 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 SSX1Q16384 188 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 RTL6Q6ICC9 239 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 FAM214BQ7L5A3 538 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 FAM220AQ7Z4H9 259 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 DCXRQ7Z4W1 244 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 KCTD20Q7Z5Y7 419 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 EGFL6Q8IUX8 553 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 OR52N5Q8NH56 324 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 UFD1Q92890 307 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 DGCR14Q96DF8 476 aaKnown RBP18.4■□□□□ 0.54
SND1-214ENST00000489417 OR8B4Q96RC9 309 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 FOXB1Q99853 325 aa18.4■□□□□ 0.54
SND1-214ENST00000489417 NAA50Q9GZZ1 169 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms