RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PITPNBP48739 271 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 DNAJB13P59910 316 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 KRTAP10-11P60412 298 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 NAA20P61599 178 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 HOXC5Q00444 222 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 NSUN5P1Q3KNT7 163 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 UGT3A2Q3SY77 523 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 FAM69AQ5T7M9 428 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 LRFN4Q6PJG9 635 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 LRRC74BQ6ZQY2 392 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 SERPINA11Q86U17 422 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 CLIP4Q8N3C7 705 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 GALNT4Q8N4A0 578 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 RBM15BQ8NDT2 890 aaKnown RBP7.58□□□□□ -1.2
SSBP1-212ENST00000489378 ADPRHL1Q8NDY3 354 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 SPATA4Q8NEY3 305 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 VPS37AQ8NEZ2 397 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 OR4S1Q8NGB4 309 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 OR4K5Q8NGD3 323 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 TWIST2Q8WVJ9 160 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 ITLN1Q8WWA0 313 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 LRTOMTQ8WZ04 291 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 TMEM54Q969K7 222 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 PLEKHA8Q96JA3 519 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 DPAGT1Q9H3H5 408 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 PPCSQ9HAB8 311 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 KLHL14Q9P2G3 628 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 MIOXQ9UGB7 285 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 VPREB3Q9UKI3 123 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 PPP1R3CQ9UQK1 317 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 CHST2Q9Y4C5 530 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 IQCMA0A1B0GVH7 501 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 RNASET2O00584 256 aaKnown RBP7.57□□□□□ -1.2
SSBP1-212ENST00000489378 TOX4O94842 621 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 CHEK2O96017 543 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 PTHP01270 115 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 MMP7P09237 267 aaPredicted RBP7.57□□□□□ -1.2
SSBP1-212ENST00000489378 TNFRSF1AP19438 455 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 CPT2P23786 658 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 GCAP28676 217 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 CRHR1P34998 444 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 APLNRP35414 380 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 CHI3L1P36222 383 aaPredicted RBP7.57□□□□□ -1.2
SSBP1-212ENST00000489378 TGFBR2P37173 567 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 EFNB2P52799 333 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 PLP2Q04941 152 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 MAPK11Q15759 364 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 SLC36A2Q495M3 483 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 RUNDC3AQ59EK9 446 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 MTX3Q5HYI7 312 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 C6orf136Q5SQH8 315 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 WDR25Q64LD2 544 aaPredicted RBP7.57□□□□□ -1.2
SSBP1-212ENST00000489378 Q6ZR03 302 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 C1orf122Q6ZSJ8 110 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 SLC16A14Q7RTX9 510 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 KLHDC1Q8N7A1 406 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 OR2Z1Q8NG97 314 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 C10orf82Q8WW14 230 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 R3HDM4Q96D70 268 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 SLC41A3Q96GZ6 507 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 PPP3R2Q96LZ3 170 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 C3orf30Q96M34 536 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 TMEM246Q9BRR3 403 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 SLC19A3Q9BZV2 496 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 RAB17Q9H0T7 212 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 GRPEL1Q9HAV7 217 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 A4GALTQ9NPC4 353 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 GLTPQ9NZD2 209 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 KIF17Q9P2E2 1029 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 MARCOQ9UEW3 520 aaPredicted RBP7.57□□□□□ -1.2
SSBP1-212ENST00000489378 CGGBP1Q9UFW8 167 aaPredicted RBP7.57□□□□□ -1.2
SSBP1-212ENST00000489378 PRDM4Q9UKN5 801 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 USH1CQ9Y6N9 552 aa7.57□□□□□ -1.2
SSBP1-212ENST00000489378 HUWE1Q7Z6Z7 4374 aaKnown RBP7.56□□□□□ -1.2
SSBP1-212ENST00000489378 LOC100509620A0A075B734 347 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 EXOC1LA0A1B0GW35 172 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 ZNF879B4DU55 563 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 ENSAO43768 121 aaKnown RBP7.56□□□□□ -1.2
SSBP1-212ENST00000489378 OR2T1O43869 369 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 TIMM8AO60220 97 aaPredicted RBP7.56□□□□□ -1.2
SSBP1-212ENST00000489378 FARS2O95363 451 aaKnown RBP7.56□□□□□ -1.2
SSBP1-212ENST00000489378 CYB5R3P00387 301 aaPredicted RBP7.56□□□□□ -1.2
SSBP1-212ENST00000489378 NR2F1P10589 423 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 G6PDP11413 515 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 SLC6A2P23975 617 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 STOMP27105 288 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 MSX2P35548 267 aaPredicted RBP7.56□□□□□ -1.2
SSBP1-212ENST00000489378 BIDP55957 195 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 PPP1CBP62140 327 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 HSF2Q03933 536 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 LIN52Q52LA3 116 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 ZMAT1Q5H9K5 638 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 PABPC1L2AQ5JQF8 200 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 FAM201AQ5SY85 155 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 ZBTB37Q5TC79 503 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 CDPF1Q6NVV7 123 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 PGBD2Q6P3X8 592 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 LYPD2Q6UXB3 125 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 CBLL1Q75N03 491 aa7.56□□□□□ -1.2
SSBP1-212ENST00000489378 PDZD9Q8IXQ8 264 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms