RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 KLHL21Q9UJP4 597 aa13.18□□□□□ -0.3
FDPS-213ENST00000489003 ABCA12Q86UK0 2595 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 FAM171A2A8MVW0 826 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 GPANK1O95872 356 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 HMGN1P05114 100 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 CST2P09228 141 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 ZNF14P17017 642 aaPredicted RBP13.17□□□□□ -0.3
FDPS-213ENST00000489003 MSR1P21757 451 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 ESRRGP62508 458 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 NAAAQ02083 359 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 SPOCK1Q08629 439 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 NPRL3Q12980 569 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 CRMP1Q14194 572 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 ENDOGQ14249 297 aaKnown RBP13.17□□□□□ -0.3
FDPS-213ENST00000489003 RAB39AQ14964 217 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 PTGES3Q15185 160 aaKnown RBP13.17□□□□□ -0.3
FDPS-213ENST00000489003 KCNMB1Q16558 191 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 OTPQ5XKR4 325 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 TMEM53Q6P2H8 277 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 DPPA2Q7Z7J5 298 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 GLB1L2Q8IW92 636 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 PQLC1Q8N2U9 271 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 PIAS4Q8N2W9 510 aaPredicted RBP13.17□□□□□ -0.3
FDPS-213ENST00000489003 KBTBD8Q8NFY9 601 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 C11orf40Q8WZ69 217 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 AKAP1Q92667 903 aaKnown RBP eCLIP13.17□□□□□ -0.3
FDPS-213ENST00000489003 PTP4A1Q93096 173 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 MS4A3Q96HJ5 214 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 RADILQ96JH8 1075 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 RBM4Q9BWF3 364 aaKnown RBP13.17□□□□□ -0.3
FDPS-213ENST00000489003 KCNN2Q9H2S1 579 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 SLC25A19Q9HC21 320 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 MOV10Q9HCE1 1003 aaKnown RBP13.17□□□□□ -0.3
FDPS-213ENST00000489003 CMC2Q9NRP2 79 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 RAI1Q7Z5J4 1906 aaPredicted RBP13.17□□□□□ -0.3
FDPS-213ENST00000489003 AKAP6Q13023 2319 aa13.17□□□□□ -0.3
FDPS-213ENST00000489003 RAB36O95755 333 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 IFNGP01579 166 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 SERPINA5P05154 406 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 ZNF32P17041 273 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 EPHA2P29317 976 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 CALCRP30988 508 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 PYCR1P32322 319 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 POLR2IP36954 125 aaKnown RBP13.16□□□□□ -0.3
FDPS-213ENST00000489003 CENPAP49450 140 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 PSG4Q00888 419 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 DNM1P34Q6PK57 102 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 ZNF584Q8IVC4 421 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 IL17RDQ8NFM7 739 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 STMN2Q93045 179 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 CIB1Q99828 191 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 RBM4BQ9BQ04 359 aaKnown RBP13.16□□□□□ -0.3
FDPS-213ENST00000489003 NMNAT2Q9BZQ4 307 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 RACGAP1Q9H0H5 632 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 MOKQ9UQ07 419 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 DSCAMO60469 2012 aa13.16□□□□□ -0.3
FDPS-213ENST00000489003 SPG11Q96JI7 2443 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 E7EQL1 145 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 SURF4O15260 269 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 TFP02787 698 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 GAAP10253 952 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 ZNF35P13682 527 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 SLC25A1P53007 311 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 LSM6P62312 80 aaKnown RBP13.15□□□□□ -0.3
FDPS-213ENST00000489003 DAG1Q14118 895 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 ZNF672Q499Z4 452 aaPredicted RBP13.15□□□□□ -0.3
FDPS-213ENST00000489003 SLC22A25Q6T423 547 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 SYT9Q86SS6 491 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 DEPDC4Q8N2C3 294 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 CPEB3Q8NE35 698 aaKnown RBP13.15□□□□□ -0.3
FDPS-213ENST00000489003 OR51L1Q8NGJ5 315 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 OR9Q1Q8NGQ5 310 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 OR2T4Q8NH00 348 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 SLC29A1Q99808 456 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 UBTD1Q9HAC8 227 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 CCNB1IP1Q9NPC3 277 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 TVP23BQ9NYZ1 205 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 CISD1Q9NZ45 108 aaKnown RBP13.15□□□□□ -0.3
FDPS-213ENST00000489003 FBXL3Q9UKT7 428 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 TIMM10BQ9Y5J6 103 aa13.15□□□□□ -0.3
FDPS-213ENST00000489003 FAM183AA6NL82 134 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 RIIAD1A6NNX1 92 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 C12orf71A8MTZ7 269 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 ATP6V1G2-DDX39BF2Z307 99 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 HS3ST1O14792 307 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 CRYAAP02489 173 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 ALPLP05186 524 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 ZNF3P17036 446 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 IGFBP5P24593 272 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 PCBD1P61457 104 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 TEKQ02763 1124 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 HSF2Q03933 536 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 HGFACQ04756 655 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 MEP1BQ16820 701 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 PABPC1L2AQ5JQF8 200 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 B3GLCTQ6Y288 498 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 CBR4Q8N4T8 237 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 ZNF611Q8N823 705 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 SLC26A10Q8NG04 563 aa13.14□□□□□ -0.31
FDPS-213ENST00000489003 AKR7LQ8NHP1 331 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms