RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 ARHGEF9O43307 516 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 ZNF780AO75290 641 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-230ENST00000488543 OPN1LWP04000 364 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 CD3GP09693 182 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 HLA-DOBP13765 273 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 AHCYP23526 432 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 HLA-DMAP28067 261 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 MAGEB1P43366 347 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 DNASE1L1P49184 302 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 MAP2K6P52564 334 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 FCN2Q15485 313 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 TP53I3Q53FA7 332 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 EEF1A1P5Q5VTE0 462 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 GALNT16Q8N428 558 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 PCNPQ8WW12 178 aaKnown RBP10.88□□□□□ -0.67
HDAC6-230ENST00000488543 PHF21AQ96BD5 680 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 NXPE2Q96DL1 559 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 MS4A3Q96HJ5 214 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 FER1L6-AS2Q96M78 137 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 SIGLEC12Q96PQ1 595 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 UBL7Q96S82 380 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-230ENST00000488543 KCNJ15Q99712 375 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 SRA1Q9HD15 236 aaKnown RBP10.88□□□□□ -0.67
HDAC6-230ENST00000488543 MOKQ9UQ07 419 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 A0A0A6YYJ9 748 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 NOTOA8MTQ0 251 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 PRR32B1ATL7 298 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 PSMD9O00233 223 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 TLX3O43711 291 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-230ENST00000488543 OR6A2O95222 327 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 RENP00797 406 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 SNRPBP14678 240 aaKnown RBP10.87□□□□□ -0.67
HDAC6-230ENST00000488543 BTCP35070 178 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 CYB561P49447 251 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 GZMKP49863 264 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 RRAS2P62070 204 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-230ENST00000488543 MFSD13AQ14CX5 517 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 CDONQ4KMG0 1287 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 MZT2AQ6P582 158 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 H1FNTQ75WM6 255 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-230ENST00000488543 WDFY1Q8IWB7 410 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 PM20D2Q8IYS1 436 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 KDM8Q8N371 416 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 ZFAND1Q8TCF1 268 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 IP6K3Q96PC2 410 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 THAP7Q9BT49 309 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-230ENST00000488543 HES7Q9BYE0 225 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 SYT4Q9H2B2 425 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 CHST11Q9NPF2 352 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 DEPPQ9NTK1 212 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 ALKBH4Q9NXW9 302 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 MRPL15Q9P015 296 aaKnown RBP10.87□□□□□ -0.67
HDAC6-230ENST00000488543 NCKAP5O14513 1909 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 KLK10O43240 276 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 WDPCPO95876 746 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 CCL11P51671 97 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 PUDPQ08623 228 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 MYBPHQ13203 477 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 ABHD17BQ5VST6 288 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 SFXN4Q6P4A7 337 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 GPALPP1Q8IXQ4 340 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 TCTE3Q8IZS6 198 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 DUSP18Q8NEJ0 188 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 BEST4Q8NFU0 473 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 OR2T4Q8NH00 348 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 GRPEL2Q8TAA5 225 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 TRMT10AQ8TBZ6 339 aaKnown RBP10.87□□□□□ -0.67
HDAC6-230ENST00000488543 TRIM63Q969Q1 353 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 ZFP3Q96NJ6 502 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 MARVELD1Q9BSK0 173 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 ABCG5Q9H222 651 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 SLA2Q9H6Q3 261 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 PTGES2Q9H7Z7 377 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 TRIM36Q9NQ86 728 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 NUDT15Q9NV35 164 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 VSX1Q9NZR4 365 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-230ENST00000488543 LRFN1Q9P244 771 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 ST6GALNAC2Q9UJ37 374 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 KLHDC2Q9Y2U9 406 aa10.87□□□□□ -0.67
HDAC6-230ENST00000488543 A0A087WZY1 265 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 A0A0G2JK05 382 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 PRSS37A4D1T9 235 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 ZZEF1O43149 2961 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 ADH6P28332 368 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 CCR6P51684 374 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 DGCR2P98153 550 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 MELKQ14680 651 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 JMJD6Q6NYC1 403 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-230ENST00000488543 C3orf33Q6P1S2 294 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 NHLRC1Q6VVB1 395 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 SLC16A9Q7RTY1 509 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 PRSS45Q7RTY3 260 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 SYS1Q8N2H4 156 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 GTPBP8Q8N3Z3 284 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-230ENST00000488543 ASB10Q8WXI3 467 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 ZBTB8AQ96BR9 441 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 TMEM41AQ96HV5 264 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 SGCZQ96LD1 299 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 TMEM185BQ9H7F4 350 aa10.86□□□□□ -0.67
HDAC6-230ENST00000488543 FANCFQ9NPI8 374 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms