RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 PSG4Q00888 419 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 BNIP1Q12981 228 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 KRR1Q13601 381 aaKnown RBP12.23□□□□□ -0.45
COL9A2-208ENST00000488463 RAB35Q15286 201 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 RFX4Q33E94 735 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 DNAL1Q4LDG9 190 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 GPR139Q6DWJ6 353 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 TMEM53Q6P2H8 277 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 PGBD2Q6P3X8 592 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 SMARCD3Q6STE5 483 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 DPY19L2P2Q6ZN68 376 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 ZNF525Q8N782 197 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 SLC30A7Q8NEW0 376 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 ZNF570Q96NI8 536 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 BTBD10Q9BSF8 475 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 REG4Q9BYZ8 158 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 MRPL37Q9BZE1 423 aaKnown RBP12.23□□□□□ -0.45
COL9A2-208ENST00000488463 TRIM15Q9C019 465 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 POLE4Q9NR33 117 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 AURKCQ9UQB9 309 aa12.23□□□□□ -0.45
COL9A2-208ENST00000488463 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.23□□□□□ -0.454e-7■■■□□ 14.8
COL9A2-208ENST00000488463 LOC100509620A0A075B734 347 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 RNF223E7ERA6 249 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 SMAD7O15105 426 aaKnown RBP12.22□□□□□ -0.45
COL9A2-208ENST00000488463 OR10H3O60404 316 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 KRT36O76013 467 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 F12P00748 615 aaPredicted RBP12.22□□□□□ -0.45
COL9A2-208ENST00000488463 HEXAP06865 529 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 CST2P09228 141 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 APEX1P27695 318 aaKnown RBP12.22□□□□□ -0.45
COL9A2-208ENST00000488463 CDKN2AP42771 156 aaKnown RBP12.22□□□□□ -0.45
COL9A2-208ENST00000488463 PPOXP50336 477 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 SNRPD2P62316 118 aaKnown RBP12.22□□□□□ -0.45
COL9A2-208ENST00000488463 TSPAN31Q12999 210 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 SGCAQ16586 387 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 PABPC1L2AQ5JQF8 200 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 UGT2A3Q6UWM9 527 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 LRP11Q86VZ4 500 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 ADGRG5Q8IZF4 528 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 SVOPLQ8N434 492 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 MRPL24Q96A35 216 aaKnown RBP12.22□□□□□ -0.45
COL9A2-208ENST00000488463 CCDC124Q96CT7 223 aaKnown RBP12.22□□□□□ -0.45
COL9A2-208ENST00000488463 POM121L2Q96KW2 1035 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 THTPAQ9BU02 230 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 ZNF416Q9BWM5 594 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 WNT5BQ9H1J7 359 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 SYT4Q9H2B2 425 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 OR52D1Q9H346 318 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 C1orf198Q9H425 327 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 CMAHPQ9Y471 501 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 IER3IP1Q9Y5U9 82 aa12.22□□□□□ -0.45
COL9A2-208ENST00000488463 DCTN6O00399 190 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 SOCS2O14508 198 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 ARPC3O15145 178 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 STAMBPO95630 424 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 PPP1R3DO95685 299 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 BMP4P12644 408 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 PCSK6P29122 969 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 EVX1P49640 407 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 NUDT6P53370 316 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 TRAP1Q12931 704 aaKnown RBP12.21□□□□□ -0.45
COL9A2-208ENST00000488463 PPP1R8Q12972 351 aaKnown RBP12.21□□□□□ -0.45
COL9A2-208ENST00000488463 CLEC9AQ6UXN8 241 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 ZNF620Q6ZNG0 422 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 Q71RC1 249 aaPredicted RBP12.21□□□□□ -0.45
COL9A2-208ENST00000488463 ADCK1Q86TW2 530 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 ZCCHC24Q8N2G6 241 aaKnown RBP12.21□□□□□ -0.45
COL9A2-208ENST00000488463 MAPK1IP1LQ8NDC0 245 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 OR9Q2Q8NGE9 314 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 AKR7LQ8NHP1 331 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 FANK1Q8TC84 345 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 C10orf105Q8TEF2 133 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 SAMD8Q96LT4 415 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 OR2H1Q9GZK4 316 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 RNF121Q9H920 327 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 KRCC1Q9NPI7 259 aaPredicted RBP12.21□□□□□ -0.45
COL9A2-208ENST00000488463 MYEF2Q9P2K5 600 aaKnown RBP12.21□□□□□ -0.45
COL9A2-208ENST00000488463 SLC7A8Q9UHI5 535 aa12.21□□□□□ -0.45
COL9A2-208ENST00000488463 TNFRSF11BO00300 401 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 XKRYO14609 159 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 ICMTO60725 284 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 TP53P04637 393 aaPredicted RBP12.2□□□□□ -0.46
COL9A2-208ENST00000488463 MSR1P21757 451 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 WNT5AP41221 380 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 ERVS71-1P61550 626 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 DBPQ10586 325 aaPredicted RBP12.2□□□□□ -0.46
COL9A2-208ENST00000488463 TMEM255AQ5JRV8 349 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 OR2T5Q6IEZ7 315 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 ZNF771Q7L3S4 317 aaPredicted RBP12.2□□□□□ -0.46
COL9A2-208ENST00000488463 SYT9Q86SS6 491 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 OR2T29Q8NH02 315 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 GNPDA2Q8TDQ7 276 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 FOXN4Q96NZ1 517 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 TSSK2Q96PF2 358 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 DDOQ99489 341 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 PLA2G12AQ9BZM1 189 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 NUAK2Q9H093 628 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 EMC7Q9NPA0 242 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 TMCC3Q9ULS5 477 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 SPEF1Q9Y4P9 236 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms