RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 PTDSS1P48651 473 aaKnown RBP9.62□□□□□ -0.87
UBE4B-210ENST00000488228 NR1H2P55055 460 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 CDK5Q00535 292 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 ENDOGQ14249 297 aaKnown RBP9.62□□□□□ -0.87
UBE4B-210ENST00000488228 TRIP10Q15642 601 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 GSG1Q2KHT4 349 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 ZNF362Q5T0B9 420 aaPredicted RBP9.62□□□□□ -0.87
UBE4B-210ENST00000488228 NCMAPQ5T1S8 102 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 DNM1P34Q6PK57 102 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 LYPD4Q6UWN0 246 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 ZNF704Q6ZNC4 412 aaPredicted RBP9.62□□□□□ -0.87
UBE4B-210ENST00000488228 SLC16A14Q7RTX9 510 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 CDC20BQ86Y33 519 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 PROKR2Q8NFJ6 384 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 OR51L1Q8NGJ5 315 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 ZNRF4Q8WWF5 429 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 NEUROG1Q92886 237 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 EME1Q96AY2 570 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 OTULINQ96BN8 352 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 FBXO17Q96EF6 278 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 MS4A3Q96HJ5 214 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 SLC38A2Q96QD8 506 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 DDOQ99489 341 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 ZNF416Q9BWM5 594 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 GABARAPL3Q9BY60 117 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 RACGAP1Q9H0H5 632 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 ESRP2Q9H6T0 727 aaKnown RBP9.62□□□□□ -0.87
UBE4B-210ENST00000488228 SRA1Q9HD15 236 aaKnown RBP9.62□□□□□ -0.87
UBE4B-210ENST00000488228 POLE4Q9NR33 117 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 B3GNT2Q9NY97 397 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 USE1Q9NZ43 259 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 B9D1Q9UPM9 204 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 RNF115Q9Y4L5 304 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 CSMD2Q7Z408 3487 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 CSMD1Q96PZ7 3565 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 PDZD2O15018 2839 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 CCDC168Q8NDH2 2452 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 ZAR1LA6NP61 321 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 ATP6V1G2-DDX39BF2Z307 99 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 MGRN1O60291 552 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 RAB36O95755 333 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 IGKV3-15P01624 115 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 IGLV1-44P01699 117 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 CD3EP07766 207 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 MMP7P09237 267 aaPredicted RBP9.61□□□□□ -0.87
UBE4B-210ENST00000488228 ZNF32P17041 273 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 SPI1P17947 270 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 NPR2P20594 1047 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 CRABP1P29762 137 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 POLR2IP36954 125 aaKnown RBP9.61□□□□□ -0.87
UBE4B-210ENST00000488228 ALDH3A2P51648 485 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 ESRRGP62508 458 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 RAB39AQ14964 217 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 PTGES3Q15185 160 aaKnown RBP9.61□□□□□ -0.87
UBE4B-210ENST00000488228 LRRC36Q1X8D7 754 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 SLC36A2Q495M3 483 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 NRN1LQ496H8 165 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 TMEM108Q6UXF1 575 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 B3GLCTQ6Y288 498 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 SSX8Q7RTT4 187 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 ZBTB46Q86UZ6 589 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 GLB1L2Q8IW92 636 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 PIAS4Q8N2W9 510 aaPredicted RBP9.61□□□□□ -0.87
UBE4B-210ENST00000488228 SLC26A10Q8NG04 563 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 C11orf40Q8WZ69 217 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 SLC29A1Q99808 456 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 TMEM204Q9BSN7 226 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 C9orf16Q9BUW7 83 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 NMNAT2Q9BZQ4 307 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 UBTD1Q9HAC8 227 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 SIAEQ9HAT2 523 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 HINT3Q9NQE9 182 aaKnown RBP9.61□□□□□ -0.87
UBE4B-210ENST00000488228 CRNNQ9UBG3 495 aaPredicted RBP9.61□□□□□ -0.87
UBE4B-210ENST00000488228 POLR1DQ9Y2S0 133 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 FKBP7Q9Y680 259 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 TEX15Q9BXT5 2789 aa9.61□□□□□ -0.87
UBE4B-210ENST00000488228 TVP23AA6NH52 213 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 SHISA9B4DS77 424 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 PRKYO43930 277 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 GOSR1O95249 250 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 HLA-DQA2P01906 255 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 CST2P09228 141 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 PSKH1P11801 424 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 HOXB1P14653 301 aaPredicted RBP9.6□□□□□ -0.87
UBE4B-210ENST00000488228 CBR1P16152 277 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 ZNF14P17017 642 aaPredicted RBP9.6□□□□□ -0.87
UBE4B-210ENST00000488228 PTAFRP25105 342 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 CALCRP30988 508 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 ARR3P36575 388 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 SLC25A1P53007 311 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 CDH11P55287 796 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 RAB1AP62820 205 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 GLO1Q04760 184 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 ZIK1Q3SY52 487 aaPredicted RBP9.6□□□□□ -0.87
UBE4B-210ENST00000488228 PABPC1L2AQ5JQF8 200 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 FAM27BQ5VT28 67 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 SLX4IPQ5VYV7 408 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 LPCAT4Q643R3 524 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 C12orf73Q69YU5 71 aa9.6□□□□□ -0.87
UBE4B-210ENST00000488228 TMEM53Q6P2H8 277 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms