RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	EFCAB9	A8MZ26	197 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	CXCR6	O00574	342 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	CCDC22	O60826	627 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	ZNF32	P17041	273 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	MAK	P20794	623 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	GCH1	P30793	250 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	PCBD1	P61457	104 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	SRSF2	Q01130	221 aa	Known RBP	10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	GLO1	Q04760	184 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	LIPE	Q05469	1076 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	ZNF718	Q3SXZ3	478 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	ZNF730	Q6ZMV8	503 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	RINL	Q6ZS11	566 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	FKBP9P1	Q75LS8	142 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	VTCN1	Q7Z7D3	282 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	OAF	Q86UD1	273 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	IGFN1	Q86VF2	1251 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	NRM	Q8IXM6	262 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	RFLNB	Q8N5W9	214 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	AKR7L	Q8NHP1	331 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	GEMIN6	Q8WXD5	167 aa	Known RBP	10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	NABP1	Q96AH0	204 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	NMD3	Q96D46	503 aa	Known RBP	10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	TSPAN32	Q96QS1	320 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	HOPX	Q9BPY8	73 aa	Predicted RBP	10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	LPAR2	Q9HBW0	351 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	HIF1AN	Q9NWT6	349 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	NKIRAS2	Q9NYR9	191 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	GRIP1	Q9Y3R0	1128 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	TIMM10B	Q9Y5J6	103 aa		10.64	□□□□□ -0.71
SREBF1-215	ENST00000487401	CHD3	Q12873	2000 aa	Known RBP	10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	TRAV27	A0A087WT01	109 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	TCF21	O43680	179 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	RP2	O75695	350 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	IGHV3-13	P01766	116 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	CST2	P09228	141 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	COX4I1	P13073	169 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	LAP3	P28838	519 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	CRYBB2	P43320	205 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	ZNF81	P51508	661 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	ERVK-25	P63136	954 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	PSG4	Q00888	419 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	PRKCD	Q05655	676 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	TST	Q16762	297 aa	Known RBP	10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	ANKDD1A	Q495B1	522 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	IFI44L	Q53G44	452 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	SPATA46	Q5T0L3	261 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	FAM27B	Q5VT28	67 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	RRM2B	Q7LG56	351 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	CYP4Z1	Q86W10	505 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	MEX3D	Q86XN8	651 aa	Known RBP	10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	SLC15A3	Q8IY34	581 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	C1orf174	Q8IYL3	243 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	RNF113B	Q8IZP6	322 aa	Known RBP	10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	OFCC1	Q8IZS5	231 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	OR51F2	Q8NH61	342 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	TMEM186	Q96B77	213 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	POM121L2	Q96KW2	1035 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	NDEL1	Q9GZM8	345 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	RACGAP1	Q9H0H5	632 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	EFCAB1	Q9HAE3	211 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	GMPR2	Q9P2T1	348 aa	Known RBP	10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	METRN	Q9UJH8	293 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	SNX13	Q9Y5W8	968 aa		10.63	□□□□□ -0.71
SREBF1-215	ENST00000487401	LOC100509620	A0A075B734	347 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	IGHV1-69-2	A0A0G2JMI3	117 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401		A0A1W2PPL8	197 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	PLSCR5	A0PG75	271 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	C12orf71	A8MTZ7	269 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	FAM157A	C9JC47	383 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401		J3KTA2	159 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	NDUFAB1	O14561	156 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	WNT9B	O14905	357 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	SPRY3	O43610	288 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	IGHM	P01871	453 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	MSMB	P08118	114 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	GAA	P10253	952 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	ANPEP	P15144	967 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	RPL4	P36578	427 aa	Known RBP	10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	WNT5A	P41221	380 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	SLC9A3	P48764	834 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	ARHGDIA	P52565	204 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	SLC7A2	P52569	658 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	MVK	Q03426	396 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	HFE	Q30201	348 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	SHQ1	Q6PI26	577 aa	Known RBP	10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	ARL9	Q6T311	187 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	MBOAT2	Q6ZWT7	520 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	USP51	Q70EK9	711 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	CLDN22	Q8N7P3	220 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	OR13C2	Q8NGS9	318 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	ABHD4	Q8TB40	342 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	ACOT11	Q8WXI4	607 aa	Predicted RBP	10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	FAM162A	Q96A26	154 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	TIMD4	Q96H15	378 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	OR2H1	Q9GZK4	316 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	WNT5B	Q9H1J7	359 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	CCDC134	Q9H6E4	229 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	SAP30L	Q9HAJ7	183 aa		10.62	□□□□□ -0.71
SREBF1-215	ENST00000487401	ELOVL3	Q9HB03	270 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms