RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 HERVK_113P61574 105 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 NUTF2P61970 127 aaKnown RBP2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 PAX5Q02548 391 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 TWF1Q12792 350 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 PON3Q15166 354 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 MRPL23Q16540 153 aaKnown RBP2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 ZSCAN26Q16670 478 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 SPANXN2Q5MJ10 180 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 LY6G6FQ5SQ64 297 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 TSPO2Q5TGU0 170 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 Q6P435 159 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 ZNF493Q6ZR52 646 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 ABHD13Q7L211 337 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 OAFQ86UD1 273 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 ZNF786Q8N393 782 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 STPG2Q8N412 459 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 OR4A4PQ8NGN8 299 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 ZNF502Q8TBZ5 544 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 MARCH1Q8TCQ1 289 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 LKAAEAR1Q8TD35 194 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 EXOSC8Q96B26 276 aaKnown RBP2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 FAM3DQ96BQ1 224 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 ZNF285Q96NJ3 590 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 C20orf24Q9BUV8 137 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 GPATCH2LQ9NWQ4 482 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 RBAKQ9NYW8 714 aaPredicted RBP2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 UXTQ9UBK9 157 aaPredicted RBP2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 ZNF629Q9UEG4 869 aaPredicted RBP2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 CD84Q9UIB8 345 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 ZNF223Q9UK11 482 aaPredicted RBP2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 UHRF1BP1LA0JNW5 1464 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 GOLGA3Q08378 1498 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 FHAD1B1AJZ9 1412 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 KIAA1107Q9UPP5 1409 aa2.25□□□□□ -2.05
SNRNP27-204ENST00000487029 CARMIL3Q8ND23 1372 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 TONSLQ96HA7 1378 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 WDR62O43379 1518 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 A0A096LNJ9 63 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 GLYATL1P3A0A0U1RQE8 302 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 SIRPB1O00241 398 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 DNALI1O14645 258 aaPredicted RBP2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 POLR3GO15318 223 aaPredicted RBP2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 CDH16O75309 829 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 HOXC4P09017 264 aaPredicted RBP2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 ZNF250P15622 560 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 SLC1A1P43005 524 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 SYKP43405 635 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 CD151P48509 253 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 CYB561P49447 251 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 RPS15P62841 145 aaKnown RBP2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 TCP10Q12799 353 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 GGTLC2Q14390 218 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 ALKBH6Q3KRA9 238 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 PPM1LQ5SGD2 360 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 CCNJQ5T5M9 372 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 ANKRD22Q5VYY1 191 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 C22orf42Q6IC83 251 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 REEP3Q6NUK4 255 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 TIFABQ6ZNK6 161 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 TEX43Q6ZNM6 134 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 SLC16A14Q7RTX9 510 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 HDDC2Q7Z4H3 204 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 LINC01551Q86U37 167 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 PCP2Q8IVA1 136 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 IQCKQ8N0W5 287 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 OR5B3Q8NH48 314 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 OR4S2Q8NH73 311 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 FAM81AQ8TBF8 368 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 C17orf50Q8WW18 174 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 FAM104AQ969W3 186 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 CEP170P1Q96L14 293 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 WFIKKN1Q96NZ8 548 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 SERPINB12Q96P63 405 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 SLC17A9Q9BYT1 436 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 IFI27L2Q9H2X8 130 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 KCNJ16Q9NPI9 418 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 VANGL2Q9ULK5 521 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 RAB26Q9ULW5 256 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 CLIP1P30622 1438 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 AKNAQ7Z591 1439 aa2.24□□□□□ -2.05
SNRNP27-204ENST00000487029 ROCK1Q13464 1354 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 BAZ1AQ9NRL2 1556 aaPredicted RBP2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 PLEKHH2Q8IVE3 1493 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 IGLV3-16A0A075B6K0 115 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 GOLGA6L4A6NEF3 574 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 ERICH4A6NGS2 130 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 C11orf94C9JXX5 98 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 SPECC1L-ADORA2AF8WAN1 911 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 NDUFAB1O14561 156 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 EIF3HO15372 352 aaKnown RBP eCLIP2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 CHST1O43916 411 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 DPM1O60762 260 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 SRP72O76094 671 aaKnown RBP2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 OR2F2O95006 317 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 RAB3DO95716 219 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 SERPINA5P05154 406 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 GNAO1P09471 354 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 EIF2S2P20042 333 aaKnown RBP2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 CX3CR1P49238 355 aa2.23□□□□□ -2.05
SNRNP27-204ENST00000487029 PSMD7P51665 324 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms