RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 LSM6P62312 80 aaKnown RBP8.39□□□□□ -1.07
MCF2L-227ENST00000486806 TGFBR3Q03167 851 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 TFF3Q07654 80 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 RAB40BQ12829 278 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 ENDOGQ14249 297 aaKnown RBP8.39□□□□□ -1.07
MCF2L-227ENST00000486806 GABRA6Q16445 453 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 TEX30Q5JUR7 227 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 SFRP5Q5T4F7 317 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 FAM27BQ5VT28 67 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 OTPQ5XKR4 325 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 ANKRD16Q6P6B7 361 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 UGT2A3Q6UWM9 527 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF813Q6ZN06 617 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 C17orf78Q8N4C9 275 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 SLC22A24Q8N4F4 322 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF808Q8N4W9 903 aaPredicted RBP8.39□□□□□ -1.07
MCF2L-227ENST00000486806 OR51G2Q8NGK0 314 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 BCL2L2Q92843 193 aaPredicted RBP8.39□□□□□ -1.07
MCF2L-227ENST00000486806 LGALS12Q96DT0 336 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 RNFT2Q96EX2 444 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 INTS14Q96SY0 518 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 AMBNQ9NP70 447 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 EMC7Q9NPA0 242 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 PAK1IP1Q9NWT1 392 aaPredicted RBP8.39□□□□□ -1.07
MCF2L-227ENST00000486806 GALNT8Q9NY28 637 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 ELOVL5Q9NYP7 299 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 CNOT2Q9NZN8 540 aaKnown RBP8.39□□□□□ -1.07
MCF2L-227ENST00000486806 H2AFY2Q9P0M6 372 aaPredicted RBP8.39□□□□□ -1.07
MCF2L-227ENST00000486806 CYB5R1Q9UHQ9 305 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 PSORS1C1Q9UIG5 152 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 KCNG2Q9UJ96 466 aa8.39□□□□□ -1.07
MCF2L-227ENST00000486806 EXOGQ9Y2C4 368 aaKnown RBP8.39□□□□□ -1.07
MCF2L-227ENST00000486806 NCOA6Q14686 2063 aaPredicted RBP8.39□□□□□ -1.07
MCF2L-227ENST00000486806 ARPC4-TTLL3A0A0A6YYG9 625 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF503-AS2A6NEH8 195 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 TRIM64A6NGJ6 449 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 FAM90A27PA6NNH2 459 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 PYCARD-AS1I3L0S3 204 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 FAM20BO75063 409 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 RAD51DO75771 328 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 APOL3O95236 402 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 IGHA1P01876 353 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 HLA-DQA2P01906 255 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 ADRA2AP08913 450 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 MRPL3P09001 348 aaKnown RBP8.38□□□□□ -1.07
MCF2L-227ENST00000486806 CST2P09228 141 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 OR8G3PP0DMU2 310 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 UGT2B10P36537 528 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 CD79BP40259 229 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 NAA10P41227 235 aaPredicted RBP8.38□□□□□ -1.07
MCF2L-227ENST00000486806 RPS27P42677 84 aaKnown RBP8.38□□□□□ -1.07
MCF2L-227ENST00000486806 CSNK2BP67870 215 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 ADAM8P78325 824 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 SLC35A2P78381 396 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 FAM27E3Q08E93 113 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 AQP6Q13520 282 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 TSC22D1Q15714 1073 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 TBRG1Q3YBR2 411 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 HIKESHIQ53FT3 197 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 RBM48Q5RL73 367 aaKnown RBP8.38□□□□□ -1.07
MCF2L-227ENST00000486806 OR7E24Q6IFN5 339 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 SLC18B1Q6NT16 456 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 XKRXQ6PP77 449 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 SHFQ7M4L6 423 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 BHLHA15Q7RTS1 189 aaPredicted RBP8.38□□□□□ -1.07
MCF2L-227ENST00000486806 SLC16A9Q7RTY1 509 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 CDC20BQ86Y33 519 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 ERI1Q8IV48 349 aaKnown RBP8.38□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF786Q8N393 782 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 BPIFB6Q8NFQ5 453 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 OR4F15Q8NGB8 312 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 OR6N2Q8NGY6 317 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 CA5BP1Q8WTZ4 195 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 GGHQ92820 318 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 FBXO17Q96EF6 278 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 SIGLEC11Q96RL6 698 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 SH3GL3Q99963 347 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF416Q9BWM5 594 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 JAM3Q9BX67 310 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 OR10A4Q9H209 315 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 SEC61A2Q9H9S3 476 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 ASH2LQ9UBL3 628 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 COPS3Q9UNS2 423 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 LHFPL6Q9Y693 200 aa8.38□□□□□ -1.07
MCF2L-227ENST00000486806 RP1L1Q8IWN7 2480 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 A0A096LPE4 126 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 A0A1W2PPZ6 126 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 CLEC18AA5D8T8 446 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 NKX2-6A6NCS4 301 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 EFCAB10A6NFE3 127 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 WIPF3A6NGB9 483 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 OR5H1A6NKK0 313 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 ZNF593O00488 134 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 FARS2O95363 451 aaKnown RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 CLDN14O95500 239 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 WNT11O96014 354 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 MMP7P09237 267 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-227ENST00000486806 SPARCP09486 303 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 RNF224P0DH78 156 aa8.37□□□□□ -1.07
MCF2L-227ENST00000486806 HOXB1P14653 301 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms