RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 OR51T1Q8NGJ9 327 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 ARL5BQ96KC2 179 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 GNRHR2Q96P88 292 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 SELENOIQ9C0D9 397 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 TMEM184BQ9Y519 407 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-216ENST00000486741 MTCL1Q9Y4B5 1905 aaKnown RBP11.97□□□□□ -0.49
HMGN1-216ENST00000486741 IFITM5A6NNB3 132 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 RAB40ALP0C0E4 278 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 RPL35P42766 123 aaKnown RBP11.97□□□□□ -0.49
HMGN1-216ENST00000486741 SPIN3Q5JUX0 258 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 GLB1L2Q8IW92 636 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 BATF2Q8N1L9 274 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 RAB40AQ8WXH6 277 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 SCARF2Q96GP6 870 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-216ENST00000486741 SIGLEC11Q96RL6 698 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 SLC22A11Q9NSA0 550 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 DSPPQ9NZW4 1301 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 SFTPBP07988 381 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 SERPINA2P20848 420 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 EPHA4P54764 986 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 INO80EQ8NBZ0 244 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-216ENST00000486741 DCBLD2Q96PD2 775 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 BRCA2P51587 3418 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 SIX6O95475 246 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 RECKO95980 971 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 KNG1P01042 644 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 THY1P04216 161 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 SMIM10L1P0DMW3 83 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 FUT7Q11130 342 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 CHRFAM7AQ494W8 412 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 STAC2Q6ZMT1 411 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 GPR155Q7Z3F1 870 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 MDGA2Q7Z553 956 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 OR4D9Q8NGE8 314 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 THAP6Q8TBB0 222 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 SMIM10Q96HG1 83 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 ABHD6Q9BV23 337 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 ZNF471Q9BX82 626 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-216ENST00000486741 MIXL1Q9H2W2 232 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 CHST11Q9NPF2 352 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 PLSCR3Q9NRY6 295 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 TAS2R8Q9NYW2 309 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 B4GALT7Q9UBV7 327 aa11.97□□□□□ -0.49
HMGN1-216ENST00000486741 COLQQ9Y215 455 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-216ENST00000486741 EXOGQ9Y2C4 368 aaKnown RBP11.97□□□□□ -0.49
HMGN1-216ENST00000486741 GABRR1P24046 479 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 HOXC12P31275 282 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 BEST3Q8N1M1 668 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 SLC25A45Q8N413 288 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 MIB2Q96AX9 1013 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 ARRDC1-AS1Q9H2J1 176 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 TXNIPQ9H3M7 391 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 OR2S2Q9NQN1 319 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 OCIAD1Q9NX40 245 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 NUP50Q9UKX7 468 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 LOC107986453A0A1B0GWG9 222 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 CD79AP11912 226 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 CCL4P13236 92 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 PER3P56645 1201 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 UBE2MP61081 183 aaKnown RBP11.96□□□□□ -0.49
HMGN1-216ENST00000486741 SLC36A2Q495M3 483 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 TSPAN32Q96QS1 320 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 CHRDQ9H2X0 955 aa11.96□□□□□ -0.49
HMGN1-216ENST00000486741 MKI67P46013 3256 aaKnown RBP11.96□□□□□ -0.5
HMGN1-216ENST00000486741 QDPRP09417 244 aa11.96□□□□□ -0.5
HMGN1-216ENST00000486741 APOBEC1P41238 236 aaKnown RBP11.96□□□□□ -0.5
HMGN1-216ENST00000486741 COL13A1Q5TAT6 717 aaPredicted RBP11.96□□□□□ -0.5
HMGN1-216ENST00000486741 METTL11BQ5VVY1 283 aa11.96□□□□□ -0.5
HMGN1-216ENST00000486741 ANXA7P20073 488 aaKnown RBP11.95□□□□□ -0.5
HMGN1-216ENST00000486741 EPHA8P29322 1005 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-216ENST00000486741 BDH1Q02338 343 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 PLP2Q04941 152 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 DMWDQ09019 674 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 C3orf33Q6P1S2 294 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 ZNF679Q8IYX0 411 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 OR51E1Q8TCB6 317 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 MED18Q9BUE0 208 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 RNF32Q9H0A6 362 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 SLC5A6Q9Y289 635 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 KANTRA0A1W2PQU2 76 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 ARPC3O15145 178 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 PLPP2O43688 288 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 RBMXL2O75526 392 aaKnown RBP11.95□□□□□ -0.5
HMGN1-216ENST00000486741 NGFRP08138 427 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 AKAIN1P0CW23 69 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 CTLA4P16410 223 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 CSNK2A1P68400 391 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-216ENST00000486741 GABREP78334 506 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 TMEM91Q6ZNR0 172 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 BPIFB2Q8N4F0 458 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 SPERTQ8NA61 448 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 NPEPL1Q8NDH3 523 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 OR56B4Q8NH76 319 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 BANF2Q9H503 90 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 NBASA2RRP1 2371 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 CIB4A0PJX0 185 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 ZNF850A8MQ14 1090 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 PEX14O75381 377 aa11.95□□□□□ -0.5
HMGN1-216ENST00000486741 RPS18P62269 152 aaKnown RBP11.95□□□□□ -0.5
HMGN1-216ENST00000486741 RSU1Q15404 277 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms