RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 MSR1P21757 451 aa15.75■□□□□ 0.11
CLDN11-206ENST00000486429 USF1P22415 310 aaPredicted RBP15.75■□□□□ 0.11
CLDN11-206ENST00000486429 APEX1P27695 318 aaKnown RBP15.75■□□□□ 0.11
CLDN11-206ENST00000486429 LAP3P28838 519 aa15.75■□□□□ 0.11
CLDN11-206ENST00000486429 SDHAP31040 664 aa15.75■□□□□ 0.11
CLDN11-206ENST00000486429 TMEM249Q2WGJ8 235 aa15.75■□□□□ 0.11
CLDN11-206ENST00000486429 GPR139Q6DWJ6 353 aa15.75■□□□□ 0.11
CLDN11-206ENST00000486429 RGS7BPQ6MZT1 257 aaPredicted RBP15.75■□□□□ 0.11
CLDN11-206ENST00000486429 ZCCHC24Q8N2G6 241 aaKnown RBP15.75■□□□□ 0.11
CLDN11-206ENST00000486429 FANK1Q8TC84 345 aa15.75■□□□□ 0.11
CLDN11-206ENST00000486429 RASD2Q96D21 266 aa15.75■□□□□ 0.11
CLDN11-206ENST00000486429 NSL1Q96IY1 281 aa15.75■□□□□ 0.11
CLDN11-206ENST00000486429 TPK1Q9H3S4 243 aa15.75■□□□□ 0.11
CLDN11-206ENST00000486429 FZR1Q9UM11 496 aa15.75■□□□□ 0.11
CLDN11-206ENST00000486429 PRSS37A4D1T9 235 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 VWC2LB2RUY7 222 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 TLX2O43763 284 aaPredicted RBP15.74■□□□□ 0.11
CLDN11-206ENST00000486429 IGFBP1P08833 259 aaPredicted RBP15.74■□□□□ 0.11
CLDN11-206ENST00000486429 DAOP14920 347 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 ATP6V1B2P21281 511 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 STOMP27105 288 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 RRM2P31350 389 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 NR4A2P43354 598 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 PCBD1P61457 104 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 GGTLC2Q14390 218 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 THSD4Q6ZMP0 1018 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 ADCK1Q86TW2 530 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 LRP11Q86VZ4 500 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 ARHGAP24Q8N264 748 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 CPEB3Q8NE35 698 aaKnown RBP15.74■□□□□ 0.11
CLDN11-206ENST00000486429 BCL2L14Q9BZR8 327 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 NRIP3Q9NQ35 241 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 POLE4Q9NR33 117 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 ACTR3BQ9P1U1 418 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 MYEF2Q9P2K5 600 aaKnown RBP15.74■□□□□ 0.11
CLDN11-206ENST00000486429 REV1Q9UBZ9 1251 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 IL20RAQ9UHF4 553 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 DUSP13Q9UII6 198 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 ADAM21Q9UKJ8 722 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 ABCA1O95477 2261 aa15.74■□□□□ 0.11
CLDN11-206ENST00000486429 SONP18583 2426 aaKnown RBP15.74■□□□□ 0.11
CLDN11-206ENST00000486429 C12orf71A8MTZ7 269 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 OR10H3O60404 316 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 PTP4A3O75365 173 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 LCKP06239 509 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 CCNOP22674 350 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 CALB2P22676 271 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 RAD52P43351 418 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 ALDH3B1P43353 468 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 FXYD6P3P58550 94 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 SELENOVP59797 346 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 PSG4Q00888 419 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 MAD2L1BPQ15013 274 aaPredicted RBP15.73■□□□□ 0.11
CLDN11-206ENST00000486429 MTX3Q5HYI7 312 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 SMARCD3Q6STE5 483 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 CYP2R1Q6VVX0 501 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 DPY19L2P2Q6ZN68 376 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 ZDHHC21Q8IVQ6 265 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 ICA1LQ8NDH6 482 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 AKR7LQ8NHP1 331 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 ZNF416Q9BWM5 594 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 OR2H1Q9GZK4 316 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 MUC13Q9H3R2 512 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 MS4A5Q9H3V2 200 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 IL1RAPQ9NPH3 570 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 YAE1D1Q9NRH1 226 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 TMCC3Q9ULS5 477 aa15.73■□□□□ 0.11
CLDN11-206ENST00000486429 SOCS2O14508 198 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 CTLA4P16410 223 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 FPR3P25089 353 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 IFNGR2P38484 337 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 GDI2P50395 445 aaKnown RBP15.72■□□□□ 0.11
CLDN11-206ENST00000486429 RPS6KA3P51812 740 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 UCP2P55851 309 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 KLF3P57682 345 aaPredicted RBP15.72■□□□□ 0.11
CLDN11-206ENST00000486429 ENDOGQ14249 297 aaKnown RBP15.72■□□□□ 0.11
CLDN11-206ENST00000486429 NKPD1Q17RQ9 610 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 ZER1Q7Z7L7 766 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 ALDH16A1Q8IZ83 802 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 ZNF540Q8NDQ6 660 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 SYNPRQ8TBG9 265 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 POM121L2Q96KW2 1035 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 FOXN4Q96NZ1 517 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 GPA33Q99795 319 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 WNT5BQ9H1J7 359 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 SYT4Q9H2B2 425 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 EMC7Q9NPA0 242 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 TIMM10BQ9Y5J6 103 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 IER3IP1Q9Y5U9 82 aa15.72■□□□□ 0.11
CLDN11-206ENST00000486429 RTTNQ86VV8 2226 aa15.71■□□□□ 0.11
CLDN11-206ENST00000486429 C5orf49A4QMS7 147 aa15.71■□□□□ 0.11
CLDN11-206ENST00000486429 STAMBPO95630 424 aa15.71■□□□□ 0.11
CLDN11-206ENST00000486429 PPP1R3DO95685 299 aa15.71■□□□□ 0.11
CLDN11-206ENST00000486429 SLC6A6P31641 620 aa15.71■□□□□ 0.11
CLDN11-206ENST00000486429 ERVS71-1P61550 626 aa15.71■□□□□ 0.11
CLDN11-206ENST00000486429 C6orf52Q5T4I8 152 aa15.71■□□□□ 0.11
CLDN11-206ENST00000486429 LCN8Q6JVE9 175 aa15.71■□□□□ 0.11
CLDN11-206ENST00000486429 UNQ6126/PRO20091Q6UXV3 157 aa15.71■□□□□ 0.11
CLDN11-206ENST00000486429 SYT9Q86SS6 491 aa15.71■□□□□ 0.11
CLDN11-206ENST00000486429 ZNF786Q8N393 782 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms