RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 PRPHP41219 470 aa2.41□□□□□ -2.02
LTN1-206ENST00000486427 EPS15P42566 896 aa2.41□□□□□ -2.02
LTN1-206ENST00000486427 LRRC74BQ6ZQY2 392 aa2.41□□□□□ -2.02
LTN1-206ENST00000486427 ZNF547Q8IVP9 402 aa2.41□□□□□ -2.02
LTN1-206ENST00000486427 ZCCHC7Q8N3Z6 543 aaKnown RBP2.41□□□□□ -2.02
LTN1-206ENST00000486427 ARL6IP6Q8N6S5 226 aa2.41□□□□□ -2.02
LTN1-206ENST00000486427 OR8U1Q8NH10 309 aa2.41□□□□□ -2.02
LTN1-206ENST00000486427 COQ8AQ8NI60 647 aa2.41□□□□□ -2.02
LTN1-206ENST00000486427 PARP12Q9H0J9 701 aaKnown RBP2.41□□□□□ -2.02
LTN1-206ENST00000486427 NT5C3AQ9H0P0 336 aa2.41□□□□□ -2.02
LTN1-206ENST00000486427 EXTL2Q9UBQ6 330 aa2.41□□□□□ -2.02
LTN1-206ENST00000486427 SIGLEC9Q9Y336 463 aa2.41□□□□□ -2.02
LTN1-206ENST00000486427 COL5A1P20908 1838 aaPredicted RBP2.4□□□□□ -2.02
LTN1-206ENST00000486427 ATAD2BQ9ULI0 1458 aa2.4□□□□□ -2.02
LTN1-206ENST00000486427 CLRN2A0PK11 232 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 HAS3O00219 553 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 SURF6O75683 361 aaKnown RBP2.4□□□□□ -2.03
LTN1-206ENST00000486427 IL1BP01584 269 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 APCSP02743 223 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 IL4P05112 153 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 UBTFL6P0CB48 400 aaPredicted RBP2.4□□□□□ -2.03
LTN1-206ENST00000486427 C1GALT1C1LP0DN25 315 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 AIF1P55008 147 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 KRTAP12-3P60328 96 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 ACTR1AP61163 376 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 TCP10Q12799 353 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 SLC39A6Q13433 755 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 SNRNP35Q16560 246 aaKnown RBP2.4□□□□□ -2.03
LTN1-206ENST00000486427 PLET1Q6UQ28 207 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 TBC1D21Q8IYX1 336 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 OR1L6Q8NGR2 347 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 OR10R2Q8NGX6 335 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 PIK3IP1Q96FE7 263 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 NPY6RQ99463 290 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 CTSFQ9UBX1 484 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 CLEC4AQ9UMR7 237 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 PEX16Q9Y5Y5 336 aa2.4□□□□□ -2.03
LTN1-206ENST00000486427 A0A1W2PPE3 182 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 YIF1AO95070 293 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 ZNF806P0C7X5 589 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 ATP1B2P14415 290 aaPredicted RBP2.39□□□□□ -2.03
LTN1-206ENST00000486427 ETS2P15036 469 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 CD34P28906 385 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 CEBPDP49716 269 aaPredicted RBP2.39□□□□□ -2.03
LTN1-206ENST00000486427 ZNF616Q08AN1 781 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 PTPN20Q4JDL3 420 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 ANKRD22Q5VYY1 191 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 CENPPQ6IPU0 288 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 PMF1Q6P1K2 205 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 FBXW12Q6X9E4 464 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 EFL1Q7Z2Z2 1120 aaKnown RBP2.39□□□□□ -2.03
LTN1-206ENST00000486427 CALHM1Q8IU99 346 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 SDR9C7Q8NEX9 313 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 OR4F6Q8NGB9 312 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 OR4K5Q8NGD3 323 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 CIRBP-AS1Q8TBR5 109 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 TCEANC2Q96MN5 208 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 CAMK2N2Q96S95 79 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 ZNF229Q9UJW7 825 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 TMCC3Q9ULS5 477 aa2.39□□□□□ -2.03
LTN1-206ENST00000486427 PCP4L1A6NKN8 68 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 CXCL11O14625 94 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 SOX15O60248 233 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 IGKV1D-16P01601 117 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 KIR3DL2P43630 455 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 CXCL12P48061 93 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 SEC61GP60059 68 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 MEF2BQ02080 365 aaPredicted RBP2.38□□□□□ -2.03
LTN1-206ENST00000486427 GK3PQ14409 553 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 CLINT1Q14677 625 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 IRF4Q15306 451 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 ZFP1Q6P2D0 407 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 CASC1Q6TDU7 716 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 H2BFWTQ7Z2G1 175 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 PRSS58Q8IYP2 241 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 MIR7-3HGQ8N6C7 128 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 EIF1ADQ8N9N8 165 aaKnown RBP2.38□□□□□ -2.03
LTN1-206ENST00000486427 BHLHE23Q8NDY6 225 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 OR10J6PQ8NGY7 276 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 LINC01560Q8TB33 94 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 FLYWCH2Q96CP2 140 aaKnown RBP2.38□□□□□ -2.03
LTN1-206ENST00000486427 SULT4A1Q9BR01 284 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 ZNF717Q9BY31 904 aaPredicted RBP2.38□□□□□ -2.03
LTN1-206ENST00000486427 CWH43Q9H720 699 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 DDX19AQ9NUU7 478 aaKnown RBP2.38□□□□□ -2.03
LTN1-206ENST00000486427 ZNF639Q9UID6 485 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 IKBKGQ9Y6K9 419 aa2.38□□□□□ -2.03
LTN1-206ENST00000486427 IGKV3D-11A0A0A0MRZ8 115 aa2.37□□□□□ -2.03
LTN1-206ENST00000486427 BTBD17A6NE02 478 aa2.37□□□□□ -2.03
LTN1-206ENST00000486427 LGALS9O00182 355 aa2.37□□□□□ -2.03
LTN1-206ENST00000486427 BPY2O14599 106 aa2.37□□□□□ -2.03
LTN1-206ENST00000486427 HLA-DQA1P01909 254 aa2.37□□□□□ -2.03
LTN1-206ENST00000486427 FGGP02679 453 aa2.37□□□□□ -2.03
LTN1-206ENST00000486427 GPX6P59796 221 aa2.37□□□□□ -2.03
LTN1-206ENST00000486427 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
LTN1-206ENST00000486427 RGS9BPQ6ZS82 235 aa2.37□□□□□ -2.03
LTN1-206ENST00000486427 RTN4IP1Q8WWV3 396 aaPredicted RBP2.37□□□□□ -2.03
LTN1-206ENST00000486427 IFT74Q96LB3 600 aa2.37□□□□□ -2.03
LTN1-206ENST00000486427 SLC39A3Q9BRY0 314 aa2.37□□□□□ -2.03
LTN1-206ENST00000486427 GON7Q9BXV9 100 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms