RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CXXC5Q7LFL8 322 aaKnown RBP9.96□□□□□ -0.82
NUP50-216ENST00000486184 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.96□□□□□ -0.82
NUP50-216ENST00000486184 ZBTB46Q86UZ6 589 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 CPOQ8IVL8 374 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 OR6V1Q8N148 313 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 TCEANCQ8N8B7 351 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 WDR31Q8NA23 367 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 OR6K6Q8NGW6 343 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 FAM81AQ8TBF8 368 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 HTRA1Q92743 480 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 KCNS3Q9BQ31 491 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 C1QTNF6Q9BXI9 259 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 OR51V1Q9H2C8 321 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 HEATR1Q9H583 2144 aaKnown RBP9.96□□□□□ -0.82
NUP50-216ENST00000486184 ESRP2Q9H6T0 727 aaKnown RBP9.96□□□□□ -0.82
NUP50-216ENST00000486184 POLE4Q9NR33 117 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 FBXL3Q9UKT7 428 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 UGT2A1Q9Y4X1 527 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 GMPPBQ9Y5P6 360 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 SLC25A15Q9Y619 301 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 UTP20O75691 2785 aaKnown RBP9.96□□□□□ -0.82
NUP50-216ENST00000486184 IGLV1-36A0A0B4J1U3 117 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 FAM171A2A8MVW0 826 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 DCTN6O00399 190 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 PRODHO43272 600 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 TLX2O43763 284 aaPredicted RBP9.95□□□□□ -0.82
NUP50-216ENST00000486184 GOSR1O95249 250 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 GYPBP06028 91 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 THBDP07204 575 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 CST2P09228 141 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 EPHA2P29317 976 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 FMO3P31513 532 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 GGT2P36268 569 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 ARR3P36575 388 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 POLR2IP36954 125 aaKnown RBP9.95□□□□□ -0.82
NUP50-216ENST00000486184 PTDSS1P48651 473 aaKnown RBP9.95□□□□□ -0.82
NUP50-216ENST00000486184 NR1H2P55055 460 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 RAB1AP62820 205 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 HSF2Q03933 536 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 PLP2Q04941 152 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 ZNF362Q5T0B9 420 aaPredicted RBP9.95□□□□□ -0.82
NUP50-216ENST00000486184 LCN1P1Q5VSP4 162 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 FAM27BQ5VT28 67 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 TMEM108Q6UXF1 575 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 FOXL2NBQ6ZUU3 175 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 MDP1Q86V88 176 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 SKA3Q8IX90 412 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 DEPDC4Q8N2C3 294 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 ACBD4Q8NC06 268 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 OR51L1Q8NGJ5 315 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 OR2AJ1Q8NGZ0 328 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 TMEM163Q8TC26 289 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 CYGBQ8WWM9 190 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 NABP1Q96AH0 204 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 PIK3IP1Q96FE7 263 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 HRASLS5Q96KN8 279 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 MBOAT4Q96T53 435 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 APOL4Q9BPW4 351 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 CDADC1Q9BWV3 514 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 GRIP2Q9C0E4 1043 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 MED20Q9H944 212 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 EMC7Q9NPA0 242 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 MOKQ9UQ07 419 aa9.95□□□□□ -0.82
NUP50-216ENST00000486184 IQCMA0A1B0GVH7 501 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 A6NNC1 897 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 M0R129 80 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 PRKYO43930 277 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 TMCC2O75069 709 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 GLCEO94923 617 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 PTHP01270 115 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 CD3EP07766 207 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 CBR1P16152 277 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 IDH3GP51553 393 aaPredicted RBP9.94□□□□□ -0.82
NUP50-216ENST00000486184 LSM6P62312 80 aaKnown RBP9.94□□□□□ -0.82
NUP50-216ENST00000486184 ADAM8P78325 824 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 TEKQ02763 1124 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 SCRN3Q0VDG4 424 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 AQP6Q13520 282 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 DAZAP2Q15038 168 aaPredicted RBP9.94□□□□□ -0.82
NUP50-216ENST00000486184 SLC35D3Q5M8T2 416 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 TTC23Q5W5X9 447 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 C22orf34Q6ZV56 151 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 TMEM200AQ86VY9 491 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 GID4Q8IVV7 300 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 ALDH16A1Q8IZ83 802 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 DHRSXQ8N5I4 330 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 OR8J1Q8NGP2 316 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 C11orf40Q8WZ69 217 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 PLPPR2Q96GM1 343 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 IL4I1Q96RQ9 567 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 WACQ9BTA9 647 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 ZNF416Q9BWM5 594 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 NMNAT2Q9BZQ4 307 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 HINT3Q9NQE9 182 aaKnown RBP9.94□□□□□ -0.82
NUP50-216ENST00000486184 FAM118AQ9NWS6 357 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 KCNG2Q9UJ96 466 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 TIMM10BQ9Y5J6 103 aa9.94□□□□□ -0.82
NUP50-216ENST00000486184 PTPN13Q12923 2485 aa9.93□□□□□ -0.82
NUP50-216ENST00000486184 LOC100130705A0A1B0GUX0 176 aa9.93□□□□□ -0.82
NUP50-216ENST00000486184 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms