RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 A0A1W2PPW3 197 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 LYNX1G3V0Z9 82 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 AHCYL1O43865 530 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 LMX1BO60663 402 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 CLPTM1O96005 669 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 TACSTD2P09758 323 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 LYNX1P0DP58 116 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 ZNF16P17020 682 aaPredicted RBP15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 ITGA2P17301 1181 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 CCNOP22674 350 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 LAP3P28838 519 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 KRT72Q14CN4 511 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 PGAM4Q8N0Y7 254 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 FAM86B1Q8N7N1 296 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 AKR7LQ8NHP1 331 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 MSI2Q96DH6 328 aaKnown RBP15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 PYURFQ96I23 114 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 FAM46AQ96IP4 442 aaKnown RBP15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 CDRT15Q96T59 188 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 NDEL1Q9GZM8 345 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 OR51B6Q9H340 312 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 SLCO1C1Q9NYB5 712 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 TAAR3PQ9P1P4 343 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 CD300AQ9UGN4 299 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 CDC42EP3Q9UKI2 254 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 SIGLEC7Q9Y286 467 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 ADAM18Q9Y3Q7 739 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 TIMM10BQ9Y5J6 103 aa15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 LOC100289279A0A1B0GTE1 492 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 XKRYO14609 159 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 LILRA1O75019 489 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 DIRAS1O95057 198 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 HPXP02790 462 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 NAT2P11245 290 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 COL8A2P25067 703 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 OMPP47874 163 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 LIMS1P48059 325 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 CHN2P52757 468 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 KLF3P57682 345 aaPredicted RBP15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 PCBD1P61457 104 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 ERVS71-1P61550 626 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 MOGQ16653 247 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 NKPD1Q17RQ9 610 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 FGD3Q5JSP0 725 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 SAMD4BQ5PRF9 694 aaKnown RBP15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 ELFN2Q5R3F8 820 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 FAM166AQ6J272 317 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 FAM122BQ7Z309 247 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 SYT9Q86SS6 491 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 ALDH16A1Q8IZ83 802 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 RDH5Q92781 318 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 DHRS1Q96LJ7 313 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 Q96M85 177 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 OR2H1Q9GZK4 316 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 WNT5BQ9H1J7 359 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 ARL8BQ9NVJ2 186 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 EIF3KQ9UBQ5 218 aaKnown RBP15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 MAGEL2Q9UJ55 1249 aa15.77■□□□□ 0.12
PRPF40A-209ENST00000486100 LOC100509620A0A075B734 347 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 TRBV4-1A0A0J9YWV2 114 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 A0A1W2PPL8 197 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 PRSS37A4D1T9 235 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 C5orf49A4QMS7 147 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 LRP5LA4QPB2 252 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 H7C1C5 153 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 DCTN3O75935 186 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 NDUFB2O95178 105 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 IFNA2P01563 188 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 MSR1P21757 451 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 GDI2P50395 445 aaKnown RBP15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 SMIM11AP58511 58 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 LCN6P62502 163 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 SEC23BQ15437 767 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 MESTQ5EB52 335 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 UNQ6126/PRO20091Q6UXV3 157 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 OR1J1Q8NGS3 322 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 OR52J3Q8NH60 311 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 HPS1Q92902 700 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 ZNF570Q96NI8 536 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 MDFIQ99750 246 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 FUZQ9BT04 418 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 WACQ9BTA9 647 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 ZNF416Q9BWM5 594 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 BEX2Q9BXY8 128 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 CHODLQ9H9P2 273 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 KRCC1Q9NPI7 259 aaPredicted RBP15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 NRIP3Q9NQ35 241 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 HINT3Q9NQE9 182 aaKnown RBP15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 POLE4Q9NR33 117 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 KCNS2Q9ULS6 477 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 AURKCQ9UQB9 309 aa15.76■□□□□ 0.11
PRPF40A-209ENST00000486100 C12orf71A8MTZ7 269 aa15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 C17orf100A8MU93 164 aa15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 SEMG1P04279 462 aa15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 SCG5P05408 212 aa15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 ACHEP22303 614 aa15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 MSX2P35548 267 aaPredicted RBP15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 MRPS11P82912 194 aaKnown RBP15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 ENDOGQ14249 297 aaKnown RBP15.75■□□□□ 0.11
PRPF40A-209ENST00000486100 ALKBH6Q3KRA9 238 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms