RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 MS4A5Q9H3V2 200 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 C1orf198Q9H425 327 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 KRCC1Q9NPI7 259 aaPredicted RBP15.18■□□□□ 0.02
COL6A1-204ENST00000486023 TAAR3PQ9P1P4 343 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 CD300AQ9UGN4 299 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 IER3IP1Q9Y5U9 82 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 JMJD1CQ15652 2540 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 A0A096LNT2 108 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 TEX13CA0A0J9YWL9 993 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 SLC22A23A1A5C7 686 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 C5orf49A4QMS7 147 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 UNC119BA6NIH7 251 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 A8MV72 311 aaPredicted RBP15.17■□□□□ 0.02
COL6A1-204ENST00000486023 NDUFS8O00217 210 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 SOCS2O14508 198 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 TLX2O43763 284 aaPredicted RBP15.17■□□□□ 0.02
COL6A1-204ENST00000486023 NDUFB2O95178 105 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 GADD45GO95257 159 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 STAMBPO95630 424 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 CENPAP49450 140 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 GDI2P50395 445 aaKnown RBP15.17■□□□□ 0.02
COL6A1-204ENST00000486023 UCP2P55851 309 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 PSG4Q00888 419 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 GLO1Q04760 184 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 SPATA46Q5T0L3 261 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 CYB5R2Q6BCY4 276 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 UGT2A3Q6UWM9 527 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 FITM2Q8N6M3 262 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 OR1J1Q8NGS3 322 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 SYNPRQ8TBG9 265 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 FNDC8Q8TC99 324 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 UBASH3BQ8TF42 649 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 C11orf40Q8WZ69 217 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 BPESC1Q9GZL8 116 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 MYOZ1Q9NP98 299 aaPredicted RBP15.17■□□□□ 0.02
COL6A1-204ENST00000486023 EMC7Q9NPA0 242 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 NDE1Q9NXR1 346 aa15.17■□□□□ 0.02
COL6A1-204ENST00000486023 IGHV4-61A0A0C4DH41 118 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 LRP5LA4QPB2 252 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 OR10H3O60404 316 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 PTP4A3O75365 173 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 CRLF1O75462 422 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 SCG5P05408 212 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 FABP3P05413 133 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 IGFBP1P08833 259 aaPredicted RBP15.16■□□□□ 0.02
COL6A1-204ENST00000486023 APEHP13798 732 aaKnown RBP15.16■□□□□ 0.02
COL6A1-204ENST00000486023 OMPP47874 163 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 MNAT1P51948 309 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 SMIM11AP58511 58 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 KRTAP21-3Q3LHN1 58 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 MESTQ5EB52 335 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 FAM27BQ5VT28 67 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 THSD4Q6ZMP0 1018 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.16■□□□□ 0.02
COL6A1-204ENST00000486023 PRIMA1Q86XR5 153 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 ALDH16A1Q8IZ83 802 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 NSL1Q96IY1 281 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 GPA33Q99795 319 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 EIF3KQ9UBQ5 218 aaKnown RBP15.16■□□□□ 0.02
COL6A1-204ENST00000486023 TMCC3Q9ULS5 477 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 SIGLEC7Q9Y286 467 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 TIMM10BQ9Y5J6 103 aa15.16■□□□□ 0.02
COL6A1-204ENST00000486023 VWC2LB2RUY7 222 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 IMPA2O14732 288 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 MGRN1O60291 552 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 SLC16A7O60669 478 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 IGHV4-31P0DP07 118 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 ZNF16P17020 682 aaPredicted RBP15.15■□□□□ 0.02
COL6A1-204ENST00000486023 EVX1P49640 407 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 KLF3P57682 345 aaPredicted RBP15.15■□□□□ 0.02
COL6A1-204ENST00000486023 KRR1Q13601 381 aaKnown RBP15.15■□□□□ 0.02
COL6A1-204ENST00000486023 C6orf52Q5T4I8 152 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 ZNF774Q6NX45 483 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 CCDC197Q8NCU1 140 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 ZNF540Q8NDQ6 660 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 ZNF416Q9BWM5 594 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 BCL2L14Q9BZR8 327 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 OR2H1Q9GZK4 316 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 CHODLQ9H9P2 273 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 ARFGEF3Q5TH69 2177 aa15.15■□□□□ 0.02
COL6A1-204ENST00000486023 SONP18583 2426 aaKnown RBP15.14■□□□□ 0.01
COL6A1-204ENST00000486023 ABCA2Q9BZC7 2435 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 LOC100509620A0A075B734 347 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 PRSS37A4D1T9 235 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 C12orf71A8MTZ7 269 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 KIAA1324LA8MWY0 1029 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-204ENST00000486023 DYNC1I1O14576 645 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 PPP1R3DO95685 299 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 HPXP02790 462 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 CST2P09228 141 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 MSR1P21757 451 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 COL8A2P25067 703 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 RRM2P31350 389 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 LIMS1P48059 325 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 PCBD1P61457 104 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 RINLQ6ZS11 566 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 ZER1Q7Z7L7 766 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 ZDHHC21Q8IVQ6 265 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 ZNF786Q8N393 782 aa15.14■□□□□ 0.01
COL6A1-204ENST00000486023 ABHD4Q8TB40 342 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms