RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 PRSS57Q6UWY2 283 aa14.96□□□□□ -0.01
VIM-205ENST00000485947 NHLRC1Q6VVB1 395 aa14.96□□□□□ -0.01
VIM-205ENST00000485947 ASB10Q8WXI3 467 aa14.96□□□□□ -0.01
VIM-205ENST00000485947 S100PBPQ96BU1 408 aa14.96□□□□□ -0.01
VIM-205ENST00000485947 ADAD1Q96M93 576 aaKnown RBP14.96□□□□□ -0.01
VIM-205ENST00000485947 DDOQ99489 341 aa14.96□□□□□ -0.01
VIM-205ENST00000485947 DUSP21Q9H596 190 aa14.96□□□□□ -0.01
VIM-205ENST00000485947 ESRP2Q9H6T0 727 aaKnown RBP14.96□□□□□ -0.01
VIM-205ENST00000485947 PSORS1C1Q9UIG5 152 aa14.96□□□□□ -0.01
VIM-205ENST00000485947 A0A087WXM4 84 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 SLC22A31A6NKX4 558 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 CENPBD1B2RD01 187 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 AKAP8O43823 692 aaKnown RBP14.95□□□□□ -0.02
VIM-205ENST00000485947 SERPINI2O75830 405 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 DBTP11182 482 aaKnown RBP14.95□□□□□ -0.02
VIM-205ENST00000485947 IFNGR1P15260 489 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 KLK2P20151 261 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 COX5AP20674 150 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 HTR1FP30939 366 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 CDKN2AP42771 156 aaKnown RBP14.95□□□□□ -0.02
VIM-205ENST00000485947 SLC15A1P46059 708 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 NUDT6P53370 316 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 ADAM8P78325 824 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 SLC35A2P78381 396 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 ZNF91Q05481 1191 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 LGALS3BPQ08380 585 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 SLC17A1Q14916 467 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 SLC35D3Q5M8T2 416 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 FBXW9Q5XUX1 488 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 BHLHA15Q7RTS1 189 aaPredicted RBP14.95□□□□□ -0.02
VIM-205ENST00000485947 GPAT4Q86UL3 456 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 KDM8Q8N371 416 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 TSPAN14Q8NG11 270 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 MYDGFQ969H8 173 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 APH1AQ96BI3 265 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 NMNAT3Q96T66 252 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 NMNAT2Q9BZQ4 307 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 MRPS18AQ9NVS2 196 aaKnown RBP14.95□□□□□ -0.02
VIM-205ENST00000485947 FKBP14Q9NWM8 211 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 VSX1Q9NZR4 365 aaPredicted RBP14.95□□□□□ -0.02
VIM-205ENST00000485947 WARS2Q9UGM6 360 aaKnown RBP14.95□□□□□ -0.02
VIM-205ENST00000485947 SCOCQ9UIL1 159 aa14.95□□□□□ -0.02
VIM-205ENST00000485947 NOSIPQ9Y314 301 aaKnown RBP14.95□□□□□ -0.02
VIM-205ENST00000485947 FAM183AA6NL82 134 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 RAMP1O60894 148 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 SMPD2O60906 423 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 PAX1P15863 534 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 SLC2A5P22732 501 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 EEF1B2P24534 225 aaKnown RBP14.94□□□□□ -0.02
VIM-205ENST00000485947 TUBA4AP68366 448 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 MELKQ14680 651 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 KLHL22Q53GT1 634 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 TIMM23BQ5SRD1 257 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 LCN1P1Q5VSP4 162 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 ZNF704Q6ZNC4 412 aaPredicted RBP14.94□□□□□ -0.02
VIM-205ENST00000485947 MEPCEQ7L2J0 689 aaKnown RBP14.94□□□□□ -0.02
VIM-205ENST00000485947 BCDIN3DQ7Z5W3 292 aaKnown RBP14.94□□□□□ -0.02
VIM-205ENST00000485947 WFDC8Q8IUA0 241 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 ZNF611Q8N823 705 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 CYB561A3Q8NBI2 242 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 OR9K2Q8NGE7 335 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 OR6X1Q8NH79 312 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 FNDC8Q8TC99 324 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 GGHQ92820 318 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 PTP4A1Q93096 173 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 OTULINQ96BN8 352 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 MUCL1Q96DR8 90 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 PLPPR2Q96GM1 343 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 CCL19Q99731 98 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 ALG12Q9BV10 488 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 MRPS26Q9BYN8 205 aaKnown RBP14.94□□□□□ -0.02
VIM-205ENST00000485947 MALT1Q9UDY8 824 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 MOKQ9UQ07 419 aa14.94□□□□□ -0.02
VIM-205ENST00000485947 HRNRQ86YZ3 2850 aaPredicted RBP14.94□□□□□ -0.02
VIM-205ENST00000485947 ACANP16112 2415 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 PRSS37A4D1T9 235 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 OR6C68A6NDL8 312 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 TRIM64CA6NLI5 447 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 MRPL33O75394 65 aaKnown RBP14.93□□□□□ -0.02
VIM-205ENST00000485947 NR2C1P13056 603 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 MTNR1AP48039 350 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 CENPAP49450 140 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 BIDP55957 195 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 NKX6-1P78426 367 aaPredicted RBP14.93□□□□□ -0.02
VIM-205ENST00000485947 RAB40BQ12829 278 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 POU4F2Q12837 409 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 APOFQ13790 326 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 TAB1Q15750 504 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 OR7E24Q6IFN5 339 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 ZNF773Q6PK81 442 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 CREB3L2Q70SY1 520 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 AHSA2Q719I0 299 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 BBS1Q8NFJ9 593 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 OR2T4Q8NH00 348 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 HS3ST6Q96QI5 342 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 KCNK17Q96T54 332 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 COPS4Q9BT78 406 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 HCAR1Q9BXC0 346 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 MED20Q9H944 212 aa14.93□□□□□ -0.02
VIM-205ENST00000485947 UBTD1Q9HAC8 227 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms