RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 LCNL1Q6ZST4 164 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 ACOT7LQ6ZUV0 252 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 FAM122BQ7Z309 247 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 BIVMQ86UB2 503 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF546Q86UE3 836 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 LDLRAD3Q86YD5 345 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 SPAG16Q8N0X2 631 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 BEST3Q8N1M1 668 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 ZDHHC22Q8N966 263 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 LRRC75AQ8NAA5 344 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 TMEM52Q8NDY8 209 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 SLC30A7Q8NEW0 376 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 TMEM185AQ8NFB2 350 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 OR4E2Q8NGC2 313 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 OR4D10Q8NGI6 311 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 OR51S1Q8NGJ8 323 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 OR1J4Q8NGS1 313 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 OR2G2Q8NGZ5 317 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 OR5AK2Q8NH90 309 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 FLVCR1-AS1Q8TAF5 88 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 ZPLD1Q8TCW7 415 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 GRHL3Q8TE85 626 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 DUSP19Q8WTR2 217 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 ARL11Q969Q4 196 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 SLC25A28Q96A46 364 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 PTX4Q96A99 478 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 CTHRC1Q96CG8 243 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 ANAPC16Q96DE5 110 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 FAHD2AQ96GK7 314 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 C4orf45Q96LM5 186 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 TSNAXQ99598 290 aaKnown RBP4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 SMAD5Q99717 465 aaKnown RBP4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 CDC6Q99741 560 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 MACROD1Q9BQ69 325 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 ALG12Q9BV10 488 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 TGIF2Q9GZN2 237 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 WDR13Q9H1Z4 485 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 POFUT1Q9H488 388 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 ADAP2Q9NPF8 381 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 TMEM138Q9NPI0 162 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 PHPT1Q9NRX4 125 aaPredicted RBP4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 ZFP57Q9NU63 452 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 FBXO34Q9NWN3 711 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 HCFC1R1Q9NWW0 138 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 SPHK1Q9NYA1 384 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 TAS2R3Q9NYW6 316 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 USP36Q9P275 1121 aaKnown RBP4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 MYEF2Q9P2K5 600 aaKnown RBP4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 CPNE7Q9UBL6 633 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 CTSFQ9UBX1 484 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 MLXQ9UH92 298 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 SLC17A4Q9Y2C5 497 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 KLHDC2Q9Y2U9 406 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 HEBP2Q9Y5Z4 205 aa4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 TCF20Q9UGU0 1960 aaKnown RBP4.23□□□□□ -1.73
SMARCC1-206ENST00000485737 MDC1Q14676 2089 aaKnown RBP4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 IGKV1D-42A0A075B6H8 117 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 NPIPA5A0A0B4J1W7 369 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 TEX13DA0A0J9YY54 714 aaPredicted RBP4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ABHD14A-ACY1A0A1B0GW23 586 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 LOC390937A0A1W2PQ73 354 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 URADA6NGE7 173 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 PCP4L1A6NKN8 68 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 IDSB3KWA1 339 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 PRRT4C9JH25 899 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 NPIPA7E9PJI5 369 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 GPR31O00270 319 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 TNFSF14O43557 240 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 FGF17O60258 216 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 SLC25A12O75746 678 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 SNAPINO95295 136 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 RAB3DO95716 219 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 GPR75O95800 540 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 CD3DP04234 171 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 RHOP08100 348 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 CD14P08571 375 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 NPIPA8P0DM63 369 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 OR8G3PP0DMU2 310 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 LYL1P12980 280 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 PVALBP20472 110 aaPredicted RBP4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ACHEP22303 614 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ZBTB25P24278 435 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 TACR3P29371 465 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 SDHAP31040 664 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 KIR3DL2P43630 455 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 SLC6A9P48067 706 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 POU3F4P49335 361 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 STARP49675 285 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 EMDP50402 254 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 EFNB2P52799 333 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 CAPZA1P52907 286 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 PRMT2P55345 433 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ERVFRD-1P60508 538 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 GPR85P60893 370 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 UBE2MP61081 183 aaKnown RBP4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ERVK-25P63136 954 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 UBE2IP63279 158 aaKnown RBP4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 RUNX2Q13950 521 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 GUCA2BQ16661 112 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms