RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 C16orf72Q14CZ0 275 aa2.55□□□□□ -2
SMC4-215ENST00000484799 NKAIN1Q4KMZ8 207 aa2.55□□□□□ -2
SMC4-215ENST00000484799 LRRC10Q5BKY1 277 aa2.55□□□□□ -2
SMC4-215ENST00000484799 RFLNAQ6ZTI6 216 aa2.55□□□□□ -2
SMC4-215ENST00000484799 VTCN1Q7Z7D3 282 aa2.55□□□□□ -2
SMC4-215ENST00000484799 TMEM150AQ86TG1 271 aa2.55□□□□□ -2
SMC4-215ENST00000484799 CMTM1Q8IZ96 169 aa2.55□□□□□ -2
SMC4-215ENST00000484799 ZNF321PQ8N8H1 164 aa2.55□□□□□ -2
SMC4-215ENST00000484799 COL22A1Q8NFW1 1626 aaPredicted RBP2.55□□□□□ -2
SMC4-215ENST00000484799 OR4F15Q8NGB8 312 aa2.55□□□□□ -2
SMC4-215ENST00000484799 OR10R2Q8NGX6 335 aa2.55□□□□□ -2
SMC4-215ENST00000484799 LYPD6BQ8NI32 183 aa2.55□□□□□ -2
SMC4-215ENST00000484799 DTX3LQ8TDB6 740 aa2.55□□□□□ -2
SMC4-215ENST00000484799 MCOLN3Q8TDD5 553 aa2.55□□□□□ -2
SMC4-215ENST00000484799 NDRG1Q92597 394 aaKnown RBP2.55□□□□□ -2
SMC4-215ENST00000484799 SLC35E1Q96K37 410 aa2.55□□□□□ -2
SMC4-215ENST00000484799 C9orf72Q96LT7 481 aa2.55□□□□□ -2
SMC4-215ENST00000484799 PLEKHF1Q96S99 279 aa2.55□□□□□ -2
SMC4-215ENST00000484799 P2RX4Q99571 388 aa2.55□□□□□ -2
SMC4-215ENST00000484799 UGT1A10Q9HAW8 530 aa2.55□□□□□ -2
SMC4-215ENST00000484799 PTTG3PQ9NZH4 202 aa2.55□□□□□ -2
SMC4-215ENST00000484799 MTRF1LQ9UGC7 380 aaKnown RBP2.55□□□□□ -2
SMC4-215ENST00000484799 MAPK8IP3Q9UPT6 1336 aa2.55□□□□□ -2
SMC4-215ENST00000484799 MROH7-TTC4A0A0A0MT08 1334 aa2.54□□□□□ -2
SMC4-215ENST00000484799 FAM25EA8MYX2 175 aa2.54□□□□□ -2
SMC4-215ENST00000484799 PEX7O00628 323 aa2.54□□□□□ -2
SMC4-215ENST00000484799 SPOPO43791 374 aa2.54□□□□□ -2
SMC4-215ENST00000484799 ZNF250P15622 560 aa2.54□□□□□ -2
SMC4-215ENST00000484799 LONP1P36776 959 aaKnown RBP2.54□□□□□ -2
SMC4-215ENST00000484799 OR1G1P47890 313 aa2.54□□□□□ -2
SMC4-215ENST00000484799 SH3BGRP55822 239 aaPredicted RBP2.54□□□□□ -2
SMC4-215ENST00000484799 NUP107P57740 925 aa2.54□□□□□ -2
SMC4-215ENST00000484799 ACTA2P62736 377 aa2.54□□□□□ -2
SMC4-215ENST00000484799 ACTG2P63267 376 aa2.54□□□□□ -2
SMC4-215ENST00000484799 ACTC1P68032 377 aa2.54□□□□□ -2
SMC4-215ENST00000484799 ACTA1P68133 377 aa2.54□□□□□ -2
SMC4-215ENST00000484799 TCP10Q12799 353 aa2.54□□□□□ -2
SMC4-215ENST00000484799 ILKQ13418 452 aa2.54□□□□□ -2
SMC4-215ENST00000484799 TRAM2Q15035 370 aa2.54□□□□□ -2
SMC4-215ENST00000484799 HSP90AA4PQ58FG1 418 aa2.54□□□□□ -2
SMC4-215ENST00000484799 CCNJQ5T5M9 372 aa2.54□□□□□ -2
SMC4-215ENST00000484799 CTRB2Q6GPI1 263 aa2.54□□□□□ -2
SMC4-215ENST00000484799 C6orf89Q6UWU4 347 aa2.54□□□□□ -2
SMC4-215ENST00000484799 LINC00523Q86TU6 105 aa2.54□□□□□ -2
SMC4-215ENST00000484799 ZNF561Q8N587 486 aa2.54□□□□□ -2
SMC4-215ENST00000484799 PRELID2Q8N945 189 aa2.54□□□□□ -2
SMC4-215ENST00000484799 CCDC54Q8NEL0 328 aa2.54□□□□□ -2
SMC4-215ENST00000484799 OR2A1Q8NGT9 310 aa2.54□□□□□ -2
SMC4-215ENST00000484799 OR6X1Q8NH79 312 aa2.54□□□□□ -2
SMC4-215ENST00000484799 OR5K2Q8NHB8 316 aa2.54□□□□□ -2
SMC4-215ENST00000484799 LKAAEAR1Q8TD35 194 aa2.54□□□□□ -2
SMC4-215ENST00000484799 FAM151AQ8WW52 585 aa2.54□□□□□ -2
SMC4-215ENST00000484799 CAPSLQ8WWF8 208 aa2.54□□□□□ -2
SMC4-215ENST00000484799 GEMIN6Q8WXD5 167 aaKnown RBP2.54□□□□□ -2
SMC4-215ENST00000484799 RASL11BQ9BPW5 248 aa2.54□□□□□ -2
SMC4-215ENST00000484799 ACTR3CQ9C0K3 210 aaPredicted RBP2.54□□□□□ -2
SMC4-215ENST00000484799 PXMP2Q9NR77 195 aa2.54□□□□□ -2
SMC4-215ENST00000484799 CCL28Q9NRJ3 127 aa2.54□□□□□ -2
SMC4-215ENST00000484799 PDS5BQ9NTI5 1447 aa2.53□□□□□ -2
SMC4-215ENST00000484799 TNIKQ9UKE5 1360 aa2.53□□□□□ -2
SMC4-215ENST00000484799 A0A0J9YYE9 177 aa2.53□□□□□ -2
SMC4-215ENST00000484799 A0A1B0GVI7 797 aa2.53□□□□□ -2
SMC4-215ENST00000484799 TMEM120BA0PK00 339 aa2.53□□□□□ -2
SMC4-215ENST00000484799 GJE1A6NN92 205 aa2.53□□□□□ -2
SMC4-215ENST00000484799 ZNF701M0R085 212 aaPredicted RBP2.53□□□□□ -2
SMC4-215ENST00000484799 SCAMP2O15127 329 aaKnown RBP2.53□□□□□ -2
SMC4-215ENST00000484799 CLDN11O75508 207 aa2.53□□□□□ -2
SMC4-215ENST00000484799 SNAI1O95863 264 aaPredicted RBP2.53□□□□□ -2
SMC4-215ENST00000484799 C6orf47O95873 294 aa2.53□□□□□ -2
SMC4-215ENST00000484799 TRBC1P01850 177 aa2.53□□□□□ -2
SMC4-215ENST00000484799 SERPINE2P07093 398 aa2.53□□□□□ -2
SMC4-215ENST00000484799 UBCP0CG48 685 aaKnown RBP2.53□□□□□ -2
SMC4-215ENST00000484799 CT45A6P0DMU7 189 aa2.53□□□□□ -2
SMC4-215ENST00000484799 CT45A5P0DMU8 189 aa2.53□□□□□ -2
SMC4-215ENST00000484799 CT45A7P0DMV0 189 aa2.53□□□□□ -2
SMC4-215ENST00000484799 IGHV3-43DP0DP04 118 aa2.53□□□□□ -2
SMC4-215ENST00000484799 CRISP2P16562 243 aa2.53□□□□□ -2
SMC4-215ENST00000484799 U2AF2P26368 475 aaKnown RBP eCLIP2.53□□□□□ -2
SMC4-215ENST00000484799 FZD2Q14332 565 aa2.53□□□□□ -2
SMC4-215ENST00000484799 STK38Q15208 465 aa2.53□□□□□ -2
SMC4-215ENST00000484799 PSMD5Q16401 504 aa2.53□□□□□ -2
SMC4-215ENST00000484799 RFX4Q33E94 735 aa2.53□□□□□ -2
SMC4-215ENST00000484799 ZBED5Q49AG3 693 aa2.53□□□□□ -2
SMC4-215ENST00000484799 HIKESHIQ53FT3 197 aa2.53□□□□□ -2
SMC4-215ENST00000484799 CT45A1Q5HYN5 189 aa2.53□□□□□ -2
SMC4-215ENST00000484799 SOHLH1Q5JUK2 328 aa2.53□□□□□ -2
SMC4-215ENST00000484799 OR52W1Q6IF63 320 aa2.53□□□□□ -2
SMC4-215ENST00000484799 FRMPD2BQ6IN97 320 aa2.53□□□□□ -2
SMC4-215ENST00000484799 H3F3CQ6NXT2 135 aa2.53□□□□□ -2
SMC4-215ENST00000484799 RALGPS2Q86X27 583 aaPredicted RBP2.53□□□□□ -2
SMC4-215ENST00000484799 TMEM61Q8N0U2 210 aa2.53□□□□□ -2
SMC4-215ENST00000484799 ARIH2OSQ8N7S6 290 aa2.53□□□□□ -2
SMC4-215ENST00000484799 HSD17B11Q8NBQ5 300 aa2.53□□□□□ -2
SMC4-215ENST00000484799 CT45A3Q8NHU0 189 aa2.53□□□□□ -2
SMC4-215ENST00000484799 SRSF12Q8WXF0 261 aaKnown RBP2.53□□□□□ -2
SMC4-215ENST00000484799 DCUN1D4Q92564 292 aa2.53□□□□□ -2
SMC4-215ENST00000484799 IL22RA2Q969J5 263 aa2.53□□□□□ -2
SMC4-215ENST00000484799 CIDECQ96AQ7 238 aaPredicted RBP2.53□□□□□ -2
SMC4-215ENST00000484799 AURKBQ96GD4 344 aaPredicted RBP2.53□□□□□ -2
SMC4-215ENST00000484799 CFAP53Q96M91 514 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms