RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 CCNB1IP1Q9NPC3 277 aa15.32■□□□□ 0.04
ATG4B-221ENST00000483778 SLCO1C1Q9NYB5 712 aa15.32■□□□□ 0.04
ATG4B-221ENST00000483778 NKIRAS2Q9NYR9 191 aa15.32■□□□□ 0.04
ATG4B-221ENST00000483778 HIF3AQ9Y2N7 669 aa15.32■□□□□ 0.04
ATG4B-221ENST00000483778 TRAV27A0A087WT01 109 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 IGHV1-69-2A0A0G2JMI3 117 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 FAM220BPB1ANY3 271 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 SPRY3O43610 288 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 PLPP2O43688 288 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 NPPAP01160 153 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 IGHV1-46P01743 117 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 ZNF26P17031 533 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-221ENST00000483778 MMP15P51511 669 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 CTXN1P60606 82 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 RPL27P61353 136 aaKnown RBP15.31■□□□□ 0.04
ATG4B-221ENST00000483778 SELENOWP63302 87 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 ALG10Q5BKT4 473 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 COQ5Q5HYK3 327 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 RFPL4BQ6ZWI9 263 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 ZNF771Q7L3S4 317 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-221ENST00000483778 SLC25A40Q8TBP6 338 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 IPCEF1Q8WWN9 437 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-221ENST00000483778 RCN3Q96D15 328 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 OR2H1Q9GZK4 316 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 OR2J1Q9GZK6 312 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 POLR2J2Q9GZM3 115 aaKnown RBP15.31■□□□□ 0.04
ATG4B-221ENST00000483778 POLR2J3Q9H1A7 115 aaKnown RBP15.31■□□□□ 0.04
ATG4B-221ENST00000483778 LRMDAQ9H2I8 198 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 ZNF665Q9H7R5 613 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 G6PC2Q9NQR9 355 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 ARMCX1Q9P291 453 aa15.31■□□□□ 0.04
ATG4B-221ENST00000483778 LOC105371242A0A075B767 164 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 ZSCAN5BA6NJL1 495 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 NPIPB13A6NJU9 1138 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 NPIPB4C9JG80 1138 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 H7C1C5 153 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 THRBP10828 461 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 ZNF81P51508 661 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 LCN6P62502 163 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 ENDOGQ14249 297 aaKnown RBP15.3■□□□□ 0.04
ATG4B-221ENST00000483778 PCGF3Q3KNV8 242 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 OTPQ5XKR4 325 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 ZNF774Q6NX45 483 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 TSEN54Q7Z6J9 526 aaKnown RBP15.3■□□□□ 0.04
ATG4B-221ENST00000483778 NRMQ8IXM6 262 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 SEMA6DQ8NFY4 1073 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 OR2T12Q8NG77 320 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 OR13C2Q8NGS9 318 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 OR51F2Q8NH61 342 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 KLF14Q8TD94 323 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-221ENST00000483778 SNX33Q8WV41 574 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 KCNN2Q9H2S1 579 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 POFUT1Q9H488 388 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 SMURF2Q9HAU4 748 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 DCAF16Q9NXF7 216 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 GPR160Q9UJ42 338 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 KLHL21Q9UJP4 597 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 WIPI2Q9Y4P8 454 aa15.3■□□□□ 0.04
ATG4B-221ENST00000483778 ELOVL7A1L3X0 281 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 BBIP1A8MTZ0 92 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 HAX1O00165 279 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 TPD52L2O43399 206 aaKnown RBP15.29■□□□□ 0.04
ATG4B-221ENST00000483778 MPZL1O95297 269 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 IFNA14P01570 189 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 DRD4P21917 467 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 GDI2P50395 445 aaKnown RBP15.29■□□□□ 0.04
ATG4B-221ENST00000483778 ST3GAL3Q11203 375 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 ZNF718Q3SXZ3 478 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 FOXL2NBQ6ZUU3 175 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 SLC15A3Q8IY34 581 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 PRRC1Q96M27 445 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 TMPRSS13Q9BYE2 586 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 DECR2Q9NUI1 292 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 GID8Q9NWU2 228 aa15.29■□□□□ 0.04
ATG4B-221ENST00000483778 A0A087WUU8 490 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 TRAV20A0A0B4J274 112 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 CDC42EP2O14613 210 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 IMPA2O14732 288 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 PRSS23O95084 383 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 IGHV2-5P01817 119 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 IGHMP01871 453 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 TROVE2P10155 538 aaKnown RBP eCLIP15.28■□□□□ 0.044e-6■□□□□ 9.4
ATG4B-221ENST00000483778 PPP1CBP62140 327 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 PRKCDQ05655 676 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 ACSM5Q6NUN0 579 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 HDDC2Q7Z4H3 204 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 ABHD4Q8TB40 342 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 CCL17Q92583 94 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 RBP7Q96R05 134 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 ALG12Q9BV10 488 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 MSL2Q9HCI7 577 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 EMC7Q9NPA0 242 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 ADAM18Q9Y3Q7 739 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 GRIP1Q9Y3R0 1128 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 DOCK11Q5JSL3 2073 aa15.28■□□□□ 0.04
ATG4B-221ENST00000483778 A0A1W2PPL8 197 aa15.27■□□□□ 0.04
ATG4B-221ENST00000483778 UBOX5O94941 541 aa15.27■□□□□ 0.04
ATG4B-221ENST00000483778 VIMP08670 466 aaKnown RBP15.27■□□□□ 0.04
ATG4B-221ENST00000483778 CST2P09228 141 aa15.27■□□□□ 0.04
ATG4B-221ENST00000483778 ADRA2CP18825 462 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms