RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 OPN3Q9H1Y3 402 aaPredicted RBP2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 LIME1Q9H400 295 aa2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 METTL8Q9H825 291 aaKnown RBP2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 PDFQ9HBH1 243 aa2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 FGF20Q9NP95 211 aaPredicted RBP2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 PRSS16Q9NQE7 514 aa2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 ABCC13Q9NSE7 274 aa2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 NECAP2Q9NVZ3 263 aa2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 THUMPD1Q9NXG2 353 aaKnown RBP2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 TAS2R16Q9NYV7 291 aa2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 WARS2Q9UGM6 360 aaKnown RBP2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 MRM2Q9UI43 246 aaKnown RBP2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 NAGKQ9UJ70 344 aa2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 POFUT2Q9Y2G5 429 aa2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 YARS2Q9Y2Z4 477 aaKnown RBP2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 FBXO7Q9Y3I1 522 aa2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 URGCP-MRPS24S4R325 110 aa2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 V9GYY9 64 aa2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 MAP3K5Q99683 1374 aa2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 PLB1Q6P1J6 1458 aa2.18□□□□□ -2.06
LAPTM4A-202ENST00000483117 RAD50Q92878 1312 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CDHR2Q9BYE9 1310 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 COL22A1Q8NFW1 1626 aaPredicted RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 A0A1B0GUS0 222 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 TSPAN11A1L157 253 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 LYRM9A8MSI8 78 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 SULT2B1O00204 365 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 DCTN6O00399 190 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CDX4O14627 284 aaPredicted RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 COCHO43405 550 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 MGRN1O60291 552 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 NDUFS6O75380 124 aaKnown RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CLDN11O75508 207 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 RPP14O95059 124 aaKnown RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 GJB5O95377 273 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 LSM8O95777 96 aaKnown RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CD160O95971 181 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 IGHG1P01857 330 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 HBE1P02100 147 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 GIG44P09565 113 aaPredicted RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 PVRP15151 417 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 MGMTP16455 207 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CTRB1P17538 263 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 PGAM1P18669 254 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 TCN1P20061 433 aaPredicted RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 TBPP20226 339 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 NPR2P20594 1047 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 SPRP35270 261 aaPredicted RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 UGT2B10P36537 528 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 ACVR1BP36896 505 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 LEPP41159 167 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 RGS6P49758 472 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CEBPGP53567 150 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 MFAP2P55001 183 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 ATP5J2P56134 94 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 UBE2G2P60604 165 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 DSTNP60981 165 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 STXBP1P61764 594 aaKnown RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 IGLV3-21P80748 117 aaPredicted RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 MRPS11P82912 194 aaKnown RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 IFFO1Q0D2I5 559 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 SLC10A7Q0GE19 358 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 SERTAD2Q14140 314 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 ARL6IP1Q15041 203 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 PSMD5Q16401 504 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 C5orf64Q2M2E5 130 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CARD16Q5EG05 197 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 NHLRC3Q5JS37 347 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CTRB2Q6GPI1 263 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 ARMCX5Q6P1M9 558 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 FAM199XQ6PEV8 388 aaPredicted RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 ZNF836Q6ZNA1 936 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 PGAP1Q75T13 922 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 NELFCDQ8IXH7 590 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 TRAM1L1Q8N609 369 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 EID2Q8N6I1 236 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 ZNF738Q8NE65 137 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CATSPER1Q8NEC5 780 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 NOXO1Q8NFA2 376 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 OR8J2Q8NGG1 315 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 OR56A4Q8NGH8 313 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 OR1S2Q8NGQ3 325 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 FANK1Q8TC84 345 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 TFB1MQ8WVM0 346 aaKnown RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 ING5Q8WYH8 240 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 S100PBPQ96BU1 408 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CENPNQ96H22 339 aaPredicted RBP2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CPB2Q96IY4 423 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 SORT1Q99523 831 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 FAIM2Q9BWQ8 316 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CHID1Q9BWS9 393 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 TMEM59Q9BXS4 323 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CALN1Q9BXU9 219 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 SIAEQ9HAT2 523 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 C6orf50Q9HD87 102 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 TREX1Q9NSU2 369 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 CLN6Q9NWW5 311 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 HMGXB4Q9UGU5 601 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 DCDC2Q9UHG0 476 aa2.17□□□□□ -2.06
LAPTM4A-202ENST00000483117 ATPIF1Q9UII2 106 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms