RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 CD300AQ9UGN4 299 aa12.9□□□□□ -0.34
TDP2-205ENST00000480495 FZR1Q9UM11 496 aa12.9□□□□□ -0.34
TDP2-205ENST00000480495 IGHV4-61A0A0C4DH41 118 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 A0A1W2PPW3 197 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 PTP4A3O75365 173 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 NDUFB2O95178 105 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 LCKP06239 509 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 APEHP13798 732 aaKnown RBP12.89□□□□□ -0.35
TDP2-205ENST00000480495 ZNF23P17027 643 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 ZNF26P17031 533 aaPredicted RBP12.89□□□□□ -0.35
TDP2-205ENST00000480495 STOMP27105 288 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 ALDH3B1P43353 468 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 OMPP47874 163 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 LIMS1P48059 325 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 MNAT1P51948 309 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 KLF3P57682 345 aaPredicted RBP12.89□□□□□ -0.35
TDP2-205ENST00000480495 MOGQ16653 247 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 GPR139Q6DWJ6 353 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 UNQ6126/PRO20091Q6UXV3 157 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 FAM122BQ7Z309 247 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 SYT9Q86SS6 491 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 ALDH16A1Q8IZ83 802 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 CLDN22Q8N7P3 220 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 SYNPRQ8TBG9 265 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 ZNF570Q96NI8 536 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 GPX7Q96SL4 187 aaPredicted RBP12.89□□□□□ -0.35
TDP2-205ENST00000480495 CDRT15Q96T59 188 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 SLCO1C1Q9NYB5 712 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 MYEF2Q9P2K5 600 aaKnown RBP12.89□□□□□ -0.35
TDP2-205ENST00000480495 ADAM21Q9UKJ8 722 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 AURKCQ9UQB9 309 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 SIGLEC7Q9Y286 467 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 ADAM18Q9Y3Q7 739 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 TIMM10BQ9Y5J6 103 aa12.89□□□□□ -0.35
TDP2-205ENST00000480495 SONP18583 2426 aaKnown RBP12.89□□□□□ -0.35
TDP2-205ENST00000480495 IGLV3-9A0A075B6K5 115 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 TRBV4-1A0A0J9YWV2 114 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 A0A1W2PPL8 197 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 PRSS37A4D1T9 235 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 C12orf71A8MTZ7 269 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 ARPC2O15144 300 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 SEMG1P04279 462 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 MSR1P21757 451 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 LAP3P28838 519 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 SDHAP31040 664 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 GDI2P50395 445 aaKnown RBP12.88□□□□□ -0.35
TDP2-205ENST00000480495 MXRA7P84157 204 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 PSG4Q00888 419 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 RIN1Q13671 783 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 MAD2L1BPQ15013 274 aaPredicted RBP12.88□□□□□ -0.35
TDP2-205ENST00000480495 NKPD1Q17RQ9 610 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 CHRFAM7AQ494W8 412 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 C1orf174Q8IYL3 243 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 MCUR1Q96AQ8 359 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 RSRC1Q96IZ7 334 aaKnown RBP12.88□□□□□ -0.35
TDP2-205ENST00000480495 POM121L2Q96KW2 1035 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 Q96M85 177 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 NSMCE2Q96MF7 247 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 FUZQ9BT04 418 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 OR2H1Q9GZK4 316 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 OR51B6Q9H340 312 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 NRIP3Q9NQ35 241 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 TAAR3PQ9P1P4 343 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 EIF3KQ9UBQ5 218 aaKnown RBP12.88□□□□□ -0.35
TDP2-205ENST00000480495 CDC42EP3Q9UKI2 254 aa12.88□□□□□ -0.35
TDP2-205ENST00000480495 LOC100509620A0A075B734 347 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 C5orf49A4QMS7 147 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 UNC119BA6NIH7 251 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 KIAA1324LA8MWY0 1029 aaPredicted RBP12.87□□□□□ -0.35
TDP2-205ENST00000480495 H7C1C5 153 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 DIRAS1O95057 198 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 GADD45GO95257 159 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 CLPTM1O96005 669 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 TACSTD2P09758 323 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 ZNF16P17020 682 aaPredicted RBP12.87□□□□□ -0.35
TDP2-205ENST00000480495 CCNOP22674 350 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 CHN2P52757 468 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 LCN6P62502 163 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 MRPS11P82912 194 aaKnown RBP12.87□□□□□ -0.35
TDP2-205ENST00000480495 KRR1Q13601 381 aaKnown RBP12.87□□□□□ -0.35
TDP2-205ENST00000480495 SEC23BQ15437 767 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 MESTQ5EB52 335 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 DPY19L2P2Q6ZN68 376 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 ADCK1Q86TW2 530 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 DEFB107AQ8IZN7 70 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 OR1J1Q8NGS3 322 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 OR52J3Q8NH60 311 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 AKR7LQ8NHP1 331 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 SNX33Q8WV41 574 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 RDH5Q92781 318 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 HPS1Q92902 700 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 WNT5BQ9H1J7 359 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 CHODLQ9H9P2 273 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 HINT3Q9NQE9 182 aaKnown RBP12.87□□□□□ -0.35
TDP2-205ENST00000480495 POLE4Q9NR33 117 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 LPAR3Q9UBY5 353 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 V9GYQ6 96 aa12.87□□□□□ -0.35
TDP2-205ENST00000480495 CHD3Q12873 2000 aaKnown RBP12.86□□□□□ -0.35
TDP2-205ENST00000480495 TEX13CA0A0J9YWL9 993 aa12.86□□□□□ -0.35
TDP2-205ENST00000480495 LOC100289279A0A1B0GTE1 492 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms