RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ELF3P78545 371 aaPredicted RBP17.18■□□□□ 0.34
LIME1-205ENST00000480139 RCN1Q15293 331 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 TMEM53Q6P2H8 277 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 SYT9Q86SS6 491 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 LRRC18Q8N456 261 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 CBR4Q8N4T8 237 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 CYB561A3Q8NBI2 242 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 HTRA1Q92743 480 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 C1QTNF6Q9BXI9 259 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 PRRG3Q9BZD7 231 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 NOX3Q9HBY0 568 aa17.18■□□□□ 0.34
LIME1-205ENST00000480139 SRA1Q9HD15 236 aaKnown RBP17.18■□□□□ 0.34
LIME1-205ENST00000480139 A0A1W2PPR1 153 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 C12orf71A8MTZ7 269 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 ABCD4O14678 606 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 GAAP10253 952 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 ZNF14P17017 642 aaPredicted RBP17.17■□□□□ 0.34
LIME1-205ENST00000480139 PCBD1P61457 104 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 PIGFQ07326 219 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 NPRL3Q12980 569 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 ENDOGQ14249 297 aaKnown RBP17.17■□□□□ 0.34
LIME1-205ENST00000480139 SLX4IPQ5VYV7 408 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 ADAM5Q6NVV9 412 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 IL17RDQ8NFM7 739 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 FGFBP3Q8TAT2 258 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 EME1Q96AY2 570 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 FN3KQ9H479 309 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 RERGLQ9H628 205 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 PLEKHF2Q9H8W4 249 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 ORC6Q9Y5N6 252 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 RAI1Q7Z5J4 1906 aaPredicted RBP17.17■□□□□ 0.34
LIME1-205ENST00000480139 ITPR2Q14571 2701 aa17.17■□□□□ 0.34
LIME1-205ENST00000480139 SCG5P05408 212 aa17.16■□□□□ 0.34
LIME1-205ENST00000480139 CECR9P0C854 216 aa17.16■□□□□ 0.34
LIME1-205ENST00000480139 PAICSP22234 425 aaKnown RBP17.16■□□□□ 0.34
LIME1-205ENST00000480139 CENPAP49450 140 aa17.16■□□□□ 0.34
LIME1-205ENST00000480139 IDH3GP51553 393 aaPredicted RBP17.16■□□□□ 0.34
LIME1-205ENST00000480139 RAD23AP54725 363 aa17.16■□□□□ 0.34
LIME1-205ENST00000480139 HSF2Q03933 536 aa17.16■□□□□ 0.34
LIME1-205ENST00000480139 TMEM236Q5W0B7 351 aa17.16■□□□□ 0.34
LIME1-205ENST00000480139 ZNF704Q6ZNC4 412 aaPredicted RBP17.16■□□□□ 0.34
LIME1-205ENST00000480139 SLC26A10Q8NG04 563 aa17.16■□□□□ 0.34
LIME1-205ENST00000480139 FBXO17Q96EF6 278 aa17.16■□□□□ 0.34
LIME1-205ENST00000480139 ZNF416Q9BWM5 594 aa17.16■□□□□ 0.34
LIME1-205ENST00000480139 C1orf198Q9H425 327 aa17.16■□□□□ 0.34
LIME1-205ENST00000480139 DCLRE1BQ9H816 532 aa17.16■□□□□ 0.34
LIME1-205ENST00000480139 CCNB1IP1Q9NPC3 277 aa17.16■□□□□ 0.34
LIME1-205ENST00000480139 PTHP01270 115 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 SERPINA5P05154 406 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 PATE4P0C8F1 98 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 SPI1P17947 270 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 EPHA2P29317 976 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 BLVRAP53004 296 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 NAAAQ02083 359 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 AQP6Q13520 282 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 C12orf73Q69YU5 71 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 ZBTB49Q6ZSB9 765 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 PROKR2Q8NFJ6 384 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 C11orf40Q8WZ69 217 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 PLEKHA8Q96JA3 519 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 RNF121Q9H920 327 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 C8orf4Q9NR00 106 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 KCNG2Q9UJ96 466 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 TIMM10BQ9Y5J6 103 aa17.15■□□□□ 0.34
LIME1-205ENST00000480139 SHISA9B4DS77 424 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 PRR23D1E9PI22 279 aaPredicted RBP17.14■□□□□ 0.33
LIME1-205ENST00000480139 CRYAAP02489 173 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 CELA3BP08861 270 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 PRR23D2P0DMB1 279 aaPredicted RBP17.14■□□□□ 0.33
LIME1-205ENST00000480139 ZNF32P17041 273 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 KRTAP10-9P60411 292 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 SNAPC1Q16533 368 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 UGT2A3Q6UWM9 527 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 MYPOPQ86VE0 399 aaPredicted RBP17.14■□□□□ 0.33
LIME1-205ENST00000480139 ZNF584Q8IVC4 421 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 DEPDC4Q8N2C3 294 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 PIAS4Q8N2W9 510 aaPredicted RBP17.14■□□□□ 0.33
LIME1-205ENST00000480139 OR9Q1Q8NGQ5 310 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 PTP4A1Q93096 173 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 LURAP1Q96LR2 239 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 FOXN4Q96NZ1 517 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 SLC29A1Q99808 456 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 RIBC2Q9H4K1 309 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 EMC7Q9NPA0 242 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 TVP23BQ9NYZ1 205 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 MOKQ9UQ07 419 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 CADP27708 2225 aa17.14■□□□□ 0.33
LIME1-205ENST00000480139 TACC2O95359 2948 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 PRODHO43272 600 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 MPZL1O95297 269 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 PLAUP00749 431 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 TFP02787 698 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 PYCR1P32322 319 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 PLP2Q04941 152 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 SPOCK1Q08629 439 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 SCRN3Q0VDG4 424 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 RAB39AQ14964 217 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 ZNF672Q499Z4 452 aaPredicted RBP17.13■□□□□ 0.33
LIME1-205ENST00000480139 PABPC1L2AQ5JQF8 200 aa17.13■□□□□ 0.33
LIME1-205ENST00000480139 SLC22A25Q6T423 547 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms