RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 FAM32AQ9Y421 112 aaKnown RBP4.26□□□□□ -1.73
PTCD3-213ENST00000480102 MTORP42345 2549 aa4.26□□□□□ -1.73
PTCD3-213ENST00000480102 PCNX1Q96RV3 2341 aa4.26□□□□□ -1.73
PTCD3-213ENST00000480102 AKAP9Q99996 3911 aa4.26□□□□□ -1.73
PTCD3-213ENST00000480102 GTF3C1Q12789 2109 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 CIB4A0PJX0 185 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 SH3PXD2BA1X283 911 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 CPSF4LA6NMK7 179 aaKnown RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 B9A039 149 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 NDUFS8O00217 210 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 ACOT8O14734 319 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 DHHO43323 396 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 RNF13O43567 381 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 LYZL6O75951 148 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 KRT33AO76009 404 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 FARS2O95363 451 aaKnown RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 CH25HO95992 272 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 HPRP00739 348 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 CRYAAP02489 173 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 SERPINA5P05154 406 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 H1F0P07305 194 aaKnown RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 CD14P08571 375 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 CSF3P09919 207 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 OR8G3PP0DMU2 310 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 RAP2AP10114 183 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF35P13682 527 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 NQO1P15559 274 aaKnown RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 FUT1P19526 365 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 EDNRAP25101 427 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 APOBEC3AP31941 199 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 TTKP33981 857 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 OMPP47874 163 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 CSNK1A1P48729 337 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 MTNR1BP49286 362 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 CLDN17P56750 224 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 UBE2NP61088 152 aaKnown RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 RPL27P61353 136 aaKnown RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 PCBD1P61457 104 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 RPS23P62266 143 aaKnown RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 NKX6-1P78426 367 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 HOXC5Q00444 222 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 ROR2Q01974 943 aaKnown RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 HGFACQ04756 655 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 RPL18Q07020 188 aaKnown RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 BSPH1Q075Z2 132 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 EXOC3L2Q2M3D2 409 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 PGGHGQ32M88 737 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 ZBED5Q49AG3 693 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 LRRC23Q53EV4 343 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 ALG10Q5BKT4 473 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 C11orf71Q6IPW1 123 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 C1orf94Q6P1W5 598 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 PLXDC2Q6UX71 529 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 DEF8Q6ZN54 512 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 DPY19L2P2Q6ZN68 376 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 SLC35D2Q76EJ3 337 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 TRPM8Q7Z2W7 1104 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 FAM122BQ7Z309 247 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 HMGN2P46Q86SG4 172 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 OAFQ86UD1 273 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 NKAIN4Q8IVV8 208 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 NRMQ8IXM6 262 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 UBE2J2Q8N2K1 259 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 PAPD5Q8NDF8 572 aaKnown RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 OR5AN1Q8NGI8 311 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 LILRB1Q8NHL6 650 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF519Q8TB69 540 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 SMAP2Q8WU79 429 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 TMEM255BQ8WV15 326 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 TMEM171Q8WVE6 324 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 SLC25A36Q96CQ1 311 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 NRBF2Q96F24 287 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 TRMT61AQ96FX7 289 aaKnown RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 DUS3LQ96G46 650 aaKnown RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 SLC38A2Q96QD8 506 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 CDRT15Q96T59 188 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 TRAF4Q9BUZ4 470 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 ULBP2Q9BZM5 246 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 POFUT1Q9H488 388 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 YY1AP1Q9H869 796 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 CRLF2Q9HC73 371 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 INIPQ9NRY2 104 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 CBLN4Q9NTU7 201 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 TAS2R1Q9NYW7 299 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 IL20Q9NYY1 176 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 VSX1Q9NZR4 365 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 C6orf203Q9P0P8 240 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-213ENST00000480102 KCNG2Q9UJ96 466 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 SIGLEC7Q9Y286 467 aa4.25□□□□□ -1.73
PTCD3-213ENST00000480102 HIVEP1P15822 2718 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 IGLV3-9A0A075B6K5 115 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 EFCAB9A8MZ26 197 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ABCD4O14678 606 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 ARPC2O15144 300 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 CLOCKO15516 846 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 SMPD2O60906 423 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 UPK3AO75631 287 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 RAD51DO75771 328 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 NDUFB2O95178 105 aa4.24□□□□□ -1.73
PTCD3-213ENST00000480102 FSTL3O95633 263 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms