RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 DCST1Q5T197 706 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 ATAD3CQ5T2N8 411 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 EEF1A1P5Q5VTE0 462 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 C1orf140Q5VVS0 124 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 ELP2Q6IA86 826 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 OR2A2Q6IF42 318 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 ZBTB49Q6ZSB9 765 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 TMPPEQ6ZT21 453 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 HIST3H2AQ7L7L0 130 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 GDF7Q7Z4P5 450 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 NOXA1Q86UR1 476 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 COMTD1Q86VU5 262 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 ADGRG3Q86Y34 549 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 DOLPP1Q86YN1 238 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 RBM45Q8IUH3 476 aaKnown RBP5.51□□□□□ -1.53
SF3B1-209ENST00000479532 NKAIN4Q8IVV8 208 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 OFCC1Q8IZS5 231 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 SLC43A2Q8N370 569 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 C10orf53Q8N6V4 93 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 IL17RDQ8NFM7 739 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 OR4D11Q8NGI4 311 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 OR5H6Q8NGV6 325 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 OR10D3Q8NH80 312 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 LRTOMTQ8WZ04 291 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 OSTF1Q92882 214 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 HIST1H2ACQ93077 130 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 PTP4A1Q93096 173 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 MYDGFQ969H8 173 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 MUL1Q969V5 352 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 RNF170Q96K19 258 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF300Q96RE9 604 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-209ENST00000479532 PIP5K1AQ99755 562 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 VKORC1Q9BQB6 163 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 TMEM43Q9BTV4 400 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 SLC19A3Q9BZV2 496 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 NXF2Q9GZY0 626 aaKnown RBP5.51□□□□□ -1.53
SF3B1-209ENST00000479532 CALHM2Q9HA72 323 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 NTN4Q9HB63 628 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 IL1RAPQ9NPH3 570 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 TMEM140Q9NV12 185 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 MED9Q9NWA0 146 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 COQ3Q9NZJ6 369 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 CCDC59Q9P031 241 aaKnown RBP5.51□□□□□ -1.53
SF3B1-209ENST00000479532 TINAGQ9UJW2 476 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 DIMT1Q9UNQ2 313 aaKnown RBP5.51□□□□□ -1.53
SF3B1-209ENST00000479532 PRELID3BQ9Y3B1 194 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 MED31Q9Y3C7 131 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 GTF3C1Q12789 2109 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 DNAJC13O75165 2243 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF407Q9C0G0 2248 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 ARHGAP21Q5T5U3 1957 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 KIAA1549Q9HCM3 1950 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 A0A0J9YW62 118 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 C9orf118A6NHY6 69 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 CD8B2A6NJW9 211 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 SLC22A20A6NK97 555 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 CLCA1A8K7I4 914 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 HSPB2A8KAH6 182 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 CXCL13O43927 109 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 TPST2O60704 377 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 OR6A2O95222 327 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 MT-ATP6P00846 226 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 CST1P01037 141 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 APOC1P02654 83 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 OPN1LWP04000 364 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 IL11P20809 199 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 MALP21145 153 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 FPR1P21462 350 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 YAP1P46937 504 aaKnown RBP5.5□□□□□ -1.53
SF3B1-209ENST00000479532 CENPAP49450 140 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 DIO1P49895 249 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 ARHGDIAP52565 204 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 SUCLG1P53597 346 aaKnown RBP5.5□□□□□ -1.53
SF3B1-209ENST00000479532 UGT2B15P54855 530 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 NKX6-1P78426 367 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-209ENST00000479532 IL1RL1Q01638 556 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 HGFACQ04756 655 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 MRPL28Q13084 256 aaKnown RBP5.5□□□□□ -1.53
SF3B1-209ENST00000479532 MYBPHQ13203 477 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 IL18R1Q13478 541 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 PON3Q15166 354 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 RNPS1Q15287 305 aaKnown RBP5.5□□□□□ -1.53
SF3B1-209ENST00000479532 OR7A5Q15622 319 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 TAB1Q15750 504 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 ATP6AP1Q15904 470 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 HSPB2Q16082 182 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 ACSF3Q4G176 576 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-209ENST00000479532 FAM69AQ5T7M9 428 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 METTL11BQ5VVY1 283 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 C1QL3Q5VWW1 255 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 NSUN5P2Q63ZY6 315 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF730Q6ZMV8 503 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 PIWIL3Q7Z3Z3 882 aaKnown RBP5.5□□□□□ -1.53
SF3B1-209ENST00000479532 LUZP2Q86TE4 346 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 FJX1Q86VR8 437 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 RNF113BQ8IZP6 322 aaKnown RBP5.5□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF786Q8N393 782 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 LINC00471Q8N535 108 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 OR6S1Q8NH40 331 aa5.5□□□□□ -1.53
SF3B1-209ENST00000479532 MFSD8Q8NHS3 518 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms