RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ZNF705DP0CH99 300 aaPredicted RBP13.06□□□□□ -0.32
COL20A1-206ENST00000479501 ZNF705BP0CI00 300 aaPredicted RBP13.06□□□□□ -0.32
COL20A1-206ENST00000479501 TGM1P22735 817 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 THBS2P35442 1172 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 SSR4P51571 173 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 TMEM201Q5SNT2 666 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 SIRT6Q8N6T7 355 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 OR13C5Q8NGS8 318 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 RRNAD1Q96FB5 475 aaKnown RBP13.06□□□□□ -0.32
COL20A1-206ENST00000479501 RADILQ96JH8 1075 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 OR11A1Q9GZK7 315 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 C20orf141Q9NUB4 165 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 LUZP4Q9P127 313 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 SHPKQ9UHJ6 478 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 MUTYHQ9UIF7 546 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 RHBDD3Q9Y3P4 386 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 IFNGR1P15260 489 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 POU3F2P20265 443 aaPredicted RBP13.06□□□□□ -0.32
COL20A1-206ENST00000479501 ETV6P41212 452 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 RPS27P42677 84 aaKnown RBP13.06□□□□□ -0.32
COL20A1-206ENST00000479501 EMP3P54852 163 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 CCDC190Q86UF4 302 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 LRRC46Q96FV0 321 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 TMEM43Q9BTV4 400 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 PLEKHJ1Q9NW61 149 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 WASF3Q9UPY6 502 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 SCN3AQ9NY46 2000 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 CKAP5Q14008 2032 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 YKT6O15498 198 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 LIMS3P0CW19 117 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 LIMS4P0CW20 117 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 RAB5CP51148 216 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 STK11Q15831 433 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 SSX1Q16384 188 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 PRICKLE4Q2TBC4 344 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 DCXRQ7Z4W1 244 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 FAM3DQ96BQ1 224 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 SEMA4CQ9C0C4 833 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 ZNF223Q9UK11 482 aaPredicted RBP13.06□□□□□ -0.32
COL20A1-206ENST00000479501 A0A0B4J2E0 115 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 A0A1B0GX12 115 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 AKR7A3O95154 331 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 APOBEC1P41238 236 aaKnown RBP13.05□□□□□ -0.32
COL20A1-206ENST00000479501 PNLIPRP2P54317 469 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 BATFQ16520 125 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 ZXDCQ2QGD7 858 aaPredicted RBP13.05□□□□□ -0.32
COL20A1-206ENST00000479501 GLYATL3Q5SZD4 288 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 SLC22A25Q6T423 547 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 UNQ6126/PRO20091Q6UXV3 157 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 MORN4Q8NDC4 146 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 OR4D11Q8NGI4 311 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 NINJ1Q92982 152 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 DCLRE1CQ96SD1 692 aaKnown RBP13.05□□□□□ -0.32
COL20A1-206ENST00000479501 SPIN2AQ99865 258 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 SPIN2BQ9BPZ2 258 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 TUBG2Q9NRH3 451 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 KCNS2Q9ULS6 477 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 HRH3Q9Y5N1 445 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 A0A087WUJ7 227 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 P2RY10O00398 339 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 CSF3P09919 207 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 CLDN6P56747 220 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 BAK1Q16611 211 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 DCAF12Q5T6F0 453 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 FAM27D1Q5T7N8 215 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 OR10R2Q8NGX6 335 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 RNF141Q8WVD5 230 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 SLAMF9Q96A28 289 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 EMC6Q9BV81 110 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 SRRQ9GZT4 340 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 FAM60AQ9NP50 221 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 STEAP1Q9UHE8 339 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 SULT1B1O43704 296 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 EML2O95834 649 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 OR10A3P58181 314 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 CD300CQ08708 224 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 C17orf107Q6ZR85 190 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 TMEM200AQ86VY9 491 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 PLPP7Q8NBV4 271 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 FRZBQ92765 325 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 MARC2Q969Z3 335 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 REV1Q9UBZ9 1251 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 OR52A1Q9UKL2 312 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 PADI1Q9ULC6 663 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 ZNF175Q9Y473 711 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 RALGAPA2Q2PPJ7 1873 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 SLC22A23A1A5C7 686 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 CELA2BP08218 269 aaPredicted RBP13.05□□□□□ -0.32
COL20A1-206ENST00000479501 PPP1CAP62136 330 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 SLC9A3R2Q15599 337 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 DCBLD2Q96PD2 775 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 CNTNAP3Q9BZ76 1288 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 GFOD1Q9NXC2 390 aa13.05□□□□□ -0.32
COL20A1-206ENST00000479501 SPAG17Q6Q759 2223 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 FRG2CA6NGY1 282 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 FTCDNL1E5RQL4 147 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 RPS2P15880 293 aaKnown RBP13.04□□□□□ -0.32
COL20A1-206ENST00000479501 CHATP28329 748 aa13.04□□□□□ -0.32
COL20A1-206ENST00000479501 FGF9P31371 208 aaPredicted RBP13.04□□□□□ -0.32
COL20A1-206ENST00000479501 CRYBB2P43320 205 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms